added EME for VI

a lot of comments
minor printing fix for ORF

Author: ksargsyan

apps/create_data.py

@@ -5,7 +5,6 @@
 import numpy as np
 import matplotlib.pyplot as plt
 
-from pytuq.func import toy, genz, chem, bench, poly, oper, func
 from pytuq.utils.xutils import instantiate_classes_from_module
 
 

apps/iuq/create_data_truepc.py

@@ -1,10 +1,9 @@
 #!/usr/bin/env python
-import os
-import sys
+
 import argparse
 import numpy as np
 
-from pytuq.utils.xutils import loadpk, read_textlist
+from pytuq.utils.xutils import loadpk
 
 
 # Parse input arguments

apps/iuq/postp_infer.py

@@ -1,14 +1,13 @@
 #!/usr/bin/env python
+
 import os
-import sys
 import argparse
 import numpy as np
 import matplotlib as mpl
 import matplotlib.cm as cm
 import matplotlib.pyplot as plt
 
 
-import pytuq.gsa.gsa as gsa
 import pytuq.minf.minf as minf
 import pytuq.utils.plotting as pup
 from pytuq.utils.xutils import loadpk, read_textlist

apps/iuq/run_infer.py

@@ -1,6 +1,5 @@
 #!/usr/bin/env python
-import os
-import sys
+
 import argparse
 import numpy as np
 
@@ -9,9 +8,8 @@
 except ModuleNotFoundError:
     print("Please pip install pprint for more readable printing.")
 
-import pytuq.gsa.gsa as gsa
 import pytuq.minf.minf as minf
-from pytuq.utils.xutils import savepk, loadpk, read_textlist
+from pytuq.utils.xutils import savepk, loadpk
 
 
 

apps/kl_fit.py

@@ -1,14 +1,13 @@
 #!/usr/bin/env python
 
 
-import sys
 import argparse
 import numpy as np
 import matplotlib.pyplot as plt
 
 from pytuq.linred.kle import KLE
 from pytuq.linred.svd import SVD
-from pytuq.utils.plotting import myrc, lighten_color, plot_dm, plot_xrv
+from pytuq.utils.plotting import myrc, plot_dm
 
 myrc()
 

apps/klsurr_fit.py

@@ -1,7 +1,6 @@
-#!/usr/bin/env python3
+#!/usr/bin/env python
 """App to build KL-pbased reduced-dimensional surrogates of multioutput models."""
 
-import sys
 import argparse
 import numpy as np
 import matplotlib
@@ -12,11 +11,9 @@
 from pytuq.rv.pcrv import PCRV
 
 from pytuq.utils.xutils import read_textlist, savepk
-from pytuq.utils.plotting import myrc, lighten_color, plot_dm, plot_sens
+from pytuq.utils.plotting import myrc, plot_dm, plot_sens
 from pytuq.utils.stats import get_domain
 
-from pytuq.workflows.fits import pc_fit
-
 myrc()
 #plt.rcParams.update({'figure.max_open_warning': 2000})
 

apps/mrun.py

@@ -1,5 +1,5 @@
-#!/usr/bin/env python3
-import os,sys,time
+#!/usr/bin/env python
+import os,sys
 import numpy as np
 from multiprocessing import Process, Lock, Pool, Manager
 

apps/nn_fit.py

@@ -9,7 +9,7 @@
 
 from pytuq.rv.pcrv import PCRV
 from pytuq.utils.xutils import read_textlist
-from pytuq.utils.plotting import myrc, lighten_color, plot_dm, plot_sens
+from pytuq.utils.plotting import myrc, plot_dm
 #from pytuq.utils.maps import scale01ToDom
 
 try:

apps/pc_fit.py

@@ -1,12 +1,12 @@
 #!/usr/bin/env python
 """App to build PC surrogates of multioutput models."""
-import sys
+
 import argparse
 import numpy as np
 import matplotlib.pyplot as plt
 
 from pytuq.utils.xutils import read_textlist, savepk
-from pytuq.utils.plotting import myrc, lighten_color, plot_dm, plot_sens
+from pytuq.utils.plotting import myrc, plot_dm, plot_sens
 #from pytuq.utils.maps import scale01ToDom
 
 from pytuq.workflows.fits import pc_fit

apps/pc_prep.py

@@ -1,7 +1,5 @@
 #!/usr/bin/env python
 
-import os
-import sys
 import argparse
 import numpy as np