remove unneeded params

Author: andrewjpage

src/alignment-file.c

@@ -63,7 +63,7 @@ int * get_snp_locations()
     return snp_locations;
 }
 
-void get_bases_for_each_snp(char filename[], int snp_locations[], char ** bases_for_snps, size_t length_of_genome, int number_of_snps)
+void get_bases_for_each_snp(char filename[], char ** bases_for_snps)
 {
   int l;
   int i = 0;

src/alignment-file.h

@@ -23,7 +23,7 @@
 #include "kseq.h"
 
 void detect_snps( char filename[]);
-void get_bases_for_each_snp(char filename[], int snp_locations[], char ** bases_for_snps, size_t length_of_genome, int number_of_snps);
+void get_bases_for_each_snp(char filename[], char ** bases_for_snps);
 int is_unknown(char base);
 int get_length_of_genome();
 int get_number_of_samples();

src/snp-sites.c

@@ -42,7 +42,7 @@ int generate_snp_sites(char filename[],int output_multi_fasta_file, int output_v
 		bases_for_snps[i] = calloc(get_number_of_samples()+1 ,sizeof(char));
 	}
 
-	get_bases_for_each_snp(filename, get_snp_locations(), bases_for_snps, get_length_of_genome(), get_number_of_snps());
+	get_bases_for_each_snp(filename, bases_for_snps);
 
 	char output_filename_base[FILENAME_MAX];
 	char filename_without_directory[FILENAME_MAX];