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0.0.32.64 Change notice insertion index to 999 in results
Updated all instances of self$results$insert(1, notice) to self$results$insert(999, notice) in datetimeconverter.b.R and multisurvival.b.R to modify the position where notices are inserted. Also incremented the version and date in DESCRIPTION and jamovi/0000.yaml to 0.0.32.64 and 2025-12-31.
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‎DESCRIPTION‎

Lines changed: 2 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -1,8 +1,8 @@
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Type: Package
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Package: jsurvival
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Title: Survival Module of ClinicoPath for jamovi
4-
Version: 0.0.32.62
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Date: 2025-12-28
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Version: 0.0.32.64
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Date: 2025-12-31
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Authors@R: person(given = "Serdar", family = "Balci", role = c("aut",
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"cre"), email = "serdarbalci@serdarbalci.com", comment =
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c(ORCID = "0000-0002-7852-3851"))

‎R/datetimeconverter.b.R‎

Lines changed: 7 additions & 7 deletions
Original file line numberDiff line numberDiff line change
@@ -55,7 +55,7 @@ datetimeconverterClass <- if (requireNamespace('jmvcore')) R6::R6Class(
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type = jmvcore::NoticeType$ERROR
5656
)
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notice$setContent('No valid datetime values found for format detection. • All values in the selected variable are missing (NA). • Select a different variable or check your data source.')
58-
self$results$insert(1, notice)
58+
self$results$insert(999, notice)
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return(list(format = "unsure", warnings = 'Auto-detection unavailable: all values missing.'))
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}
6161

@@ -148,7 +148,7 @@ datetimeconverterClass <- if (requireNamespace('jmvcore')) R6::R6Class(
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type = jmvcore::NoticeType$WARNING
149149
)
150150
notice$setContent(msg)
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self$results$insert(1, notice)
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self$results$insert(999, notice)
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153153
return(msg)
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},
@@ -482,7 +482,7 @@ datetimeconverterClass <- if (requireNamespace('jmvcore')) R6::R6Class(
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'Error parsing datetimes with format "%s". • Parser error: %s • Try selecting a different format. • Check that your data matches the selected format.',
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format, e$message
484484
))
485-
self$results$insert(1, notice)
485+
self$results$insert(999, notice)
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# Return NA vector to allow analysis to continue
487487
return(rep(as.POSIXct(NA), length(datetime_vector)))
488488
})
@@ -1244,7 +1244,7 @@ datetimeconverterClass <- if (requireNamespace('jmvcore')) R6::R6Class(
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type = jmvcore::NoticeType$ERROR
12451245
)
12461246
notice$setContent('No datetime variable selected. • Please select a variable containing datetime information from the left panel. • Use the "DateTime Variable" dropdown to choose a column.')
1247-
self$results$insert(1, notice)
1247+
self$results$insert(999, notice)
12481248
return()
12491249
}
12501250

@@ -1267,7 +1267,7 @@ datetimeconverterClass <- if (requireNamespace('jmvcore')) R6::R6Class(
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datetime_var,
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available_preview
12691269
))
1270-
self$results$insert(1, notice)
1270+
self$results$insert(999, notice)
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return()
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}
12731273

@@ -1278,7 +1278,7 @@ datetimeconverterClass <- if (requireNamespace('jmvcore')) R6::R6Class(
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type = jmvcore::NoticeType$ERROR
12791279
)
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notice$setContent('Dataset contains no rows. • Please ensure your dataset has at least one observation. • Check for data loading or filtering issues.')
1281-
self$results$insert(1, notice)
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self$results$insert(999, notice)
12821282
return()
12831283
}
12841284

@@ -1298,7 +1298,7 @@ datetimeconverterClass <- if (requireNamespace('jmvcore')) R6::R6Class(
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"All values in '%s' are missing (NA). • Please select a column with valid datetime entries before proceeding.",
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datetime_var
13001300
))
1301-
self$results$insert(1, notice)
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self$results$insert(999, notice)
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return()
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}
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‎R/multisurvival.b.R‎

Lines changed: 5 additions & 5 deletions
Original file line numberDiff line numberDiff line change
@@ -2181,7 +2181,7 @@ multisurvivalClass <- if (requireNamespace('jmvcore'))
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"Critical: Only %d events detected. Cox regression requires at least 10 events for reliable estimation. Recommendations: (1) Collect more data, (2) Extend follow-up period, (3) Use descriptive methods (Kaplan-Meier) instead of regression, or (4) Pool event types if clinically appropriate.",
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n_events
21832183
))
2184-
self$results$insert(1, notice)
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self$results$insert(999, notice)
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return(NULL)
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}
21872187

@@ -2196,7 +2196,7 @@ multisurvivalClass <- if (requireNamespace('jmvcore'))
21962196
"Low event count (%d events). Results may be unstable; confidence intervals may be unreliable; small-sample bias likely. Recommendations: (1) Interpret results cautiously and report exact p-values, (2) Consider Firth's penalized likelihood in R (coxphf package) for bias reduction, (3) Validate findings externally, or (4) Collect additional data if feasible.",
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n_events
21982198
))
2199-
self$results$insert(1, notice)
2199+
self$results$insert(999, notice)
22002200
}
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22022202
# WARNING: 20-49 events - Limited statistical power
@@ -2729,7 +2729,7 @@ multisurvivalClass <- if (requireNamespace('jmvcore'))
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type = jmvcore::NoticeType$ERROR
27302730
)
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notice$setContent("AFT Model Error: Outcome with more than two levels is not supported for AFT models. Please select a binary outcome variable or disable competing risk analysis for AFT.")
2732-
self$results$insert(1, notice)
2732+
self$results$insert(999, notice)
27332733
return()
27342734
}
27352735
}
@@ -2767,7 +2767,7 @@ multisurvivalClass <- if (requireNamespace('jmvcore'))
27672767
type = jmvcore::NoticeType$ERROR
27682768
)
27692769
notice$setContent(paste0("AFT Model Fitting Error: ", e$message, ". Check data quality, ensure adequate events, and verify distribution choice is appropriate for your data."))
2770-
self$results$insert(1, notice)
2770+
self$results$insert(999, notice)
27712771
return(NULL)
27722772
})
27732773

@@ -6686,7 +6686,7 @@ where 0.5 suggests no discriminative ability and 1.0 indicates perfect discrimin
66866686
type = jmvcore::NoticeType$ERROR
66876687
)
66886688
notice$setContent(paste0("Survival Decision Tree Error: ", e$message, ". Recommendations: (1) Check sufficient data for tree building, (2) Try reducing minimum node size, or (3) Ensure variables contain valid data."))
6689-
self$results$insert(1, notice)
6689+
self$results$insert(999, notice)
66906690
return(NULL)
66916691
})
66926692
}

‎jamovi/0000.yaml‎

Lines changed: 2 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -1,12 +1,12 @@
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---
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title: Survival Module of ClinicoPath for jamovi
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name: jsurvival
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version: 0.0.32.62
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version: 0.0.32.64
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jms: '1.0'
66
authors:
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- Serdar Balci
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maintainer: Serdar Balci <serdarbalci@serdarbalci.com>
9-
date: '2025-12-28'
9+
date: '2025-12-31'
1010
type: R
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description: >-
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Survival Module of ClinicoPath for jamovi ClinicoPath help researchers to

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