Merge branch 'master' of github.com:scalableminds/webknossos-libs

Author: hotzenklotz

.github/dependabot.yml

@@ -38,7 +38,7 @@ jobs:
       max-parallel: 4
       matrix:
         executors: [multiprocessing, slurm, kubernetes, dask]
-        python-version: ["3.11", "3.10", "3.9", "3.8"]
+        python-version: ["3.12", "3.11", "3.10", "3.9"]
     defaults:
       run:
         working-directory: cluster_tools
@@ -54,8 +54,8 @@ jobs:
         run: |
           cd ./dockered-slurm
 
-          echo docker-compose up
-          docker-compose up -d
+          echo docker compose up
+          docker compose up -d
 
           # Register cluster (with retry)
           for i in {1..5}; do
@@ -138,7 +138,7 @@ jobs:
           PYTEST_EXECUTORS=kubernetes poetry run python -m pytest -sv test_all.py test_kubernetes.py
 
       - name: Run dask tests
-        if: ${{ matrix.executors == 'dask' && matrix.python-version != '3.8' }}
+        if: ${{ matrix.executors == 'dask' }}
         run: |
           cd tests
           PYTEST_EXECUTORS=dask poetry run python -m pytest -sv test_all.py test_dask.py
@@ -152,7 +152,7 @@ jobs:
     strategy:
       max-parallel: 4
       matrix:
-        python-version: ["3.11", "3.10", "3.9", "3.8"]
+        python-version: ["3.12", "3.11", "3.10", "3.9"]
         group: [1, 2, 3]
       fail-fast: false
     defaults:

.github/workflows/ci.yml

@@ -11,7 +11,7 @@ jobs:
     strategy:
       max-parallel: 4
       matrix:
-        python-version: ["3.8", "3.9", "3.10", "3.11"]
+        python-version: ["3.9", "3.10", "3.11", "3.12"]
         group: [1, 2, 3]
       fail-fast: false
     defaults:

.github/workflows/nightly.yml

@@ -140,7 +140,7 @@ The `webknossos` folder contains examples, which are not part of the package, bu
 The tests also contain functionality for the WEBKNOSSOS client. There a two modes to run the tests:
 
 1. `./test.sh --refresh-snapshots`, sending network requests to a WEBKNOSSOS instance:
-  This expects a local WEBKNOSSOS setup with specific test data, which is shipped with WEBKNOSSOS. If you're starting and running WEBKNOSSOS manually, please use port 9000 (the default) and run the `tools/postgres/prepareTestDb.sh` script in the WEBKNOSSOS repository (⚠️ this overwrites your local WEBKNOSSOS database). Alternatively, a docker-compose setup is started automatically for the tests, see `./test.sh` and `tests/docker-compose.yml` for details. The network requests & response are recorded as "cassettes" by [vcr.py](https://vcrpy.readthedocs.io), see next point:
+  This expects a local WEBKNOSSOS setup with specific test data, which is shipped with WEBKNOSSOS. If you're starting and running WEBKNOSSOS manually, please use port 9000 (the default) and run the `tools/postgres/dbtool.js prepare-test-db` script in the WEBKNOSSOS repository (⚠️ this overwrites your local WEBKNOSSOS database). Alternatively, a docker-compose setup is started automatically for the tests, see `./test.sh` and `tests/docker-compose.yml` for details. The network requests & response are recorded as "cassettes" by [vcr.py](https://vcrpy.readthedocs.io), see next point:
 2. `./test.sh` replays responses from previous network snapshots using [vcr.py](https://vcrpy.readthedocs.io) via [pytest-recording](https://github.com/kiwicom/pytest-recording). No additional network requests are allowed in this mode.
 
 `./test.sh --store-durations` updates the durations for

CONTRIBUTING.md

@@ -7,7 +7,7 @@ and this project adheres to [Semantic Versioning](http://semver.org/) `MAJOR.MIN
 For upgrade instructions, please check the respective *Breaking Changes* sections.
 
 ## Unreleased
-[Commits](https://github.com/scalableminds/webknossos-libs/compare/v0.14.22...HEAD)
+[Commits](https://github.com/scalableminds/webknossos-libs/compare/v0.15.1...HEAD)
 
 ### Breaking Changes
 
@@ -18,6 +18,30 @@ For upgrade instructions, please check the respective *Breaking Changes* section
 ### Fixed
 
 
+## [0.15.1](https://github.com/scalableminds/webknossos-libs/releases/tag/v0.15.1) - 2024-08-13
+[Commits](https://github.com/scalableminds/webknossos-libs/compare/v0.15.0...v0.15.1)
+
+
+## [0.15.0](https://github.com/scalableminds/webknossos-libs/releases/tag/v0.15.0) - 2024-08-09
+[Commits](https://github.com/scalableminds/webknossos-libs/compare/v0.14.26...v0.15.0)
+
+
+## [0.14.26](https://github.com/scalableminds/webknossos-libs/releases/tag/v0.14.26) - 2024-07-22
+[Commits](https://github.com/scalableminds/webknossos-libs/compare/v0.14.25...v0.14.26)
+
+
+## [0.14.25](https://github.com/scalableminds/webknossos-libs/releases/tag/v0.14.25) - 2024-07-18
+[Commits](https://github.com/scalableminds/webknossos-libs/compare/v0.14.24...v0.14.25)
+
+
+## [0.14.24](https://github.com/scalableminds/webknossos-libs/releases/tag/v0.14.24) - 2024-07-09
+[Commits](https://github.com/scalableminds/webknossos-libs/compare/v0.14.23...v0.14.24)
+
+
+## [0.14.23](https://github.com/scalableminds/webknossos-libs/releases/tag/v0.14.23) - 2024-06-28
+[Commits](https://github.com/scalableminds/webknossos-libs/compare/v0.14.22...v0.14.23)
+
+
 ## [0.14.22](https://github.com/scalableminds/webknossos-libs/releases/tag/v0.14.22) - 2024-05-13
 [Commits](https://github.com/scalableminds/webknossos-libs/compare/v0.14.21...v0.14.22)
 

cluster_tools/Changelog.md

@@ -22,7 +22,7 @@ if __name__ == '__main__':
 ```
 
 ## Installation
-The `cluster_tools` package requires at least Python 3.8.
+The `cluster_tools` package requires at least Python 3.9.
 
 You can install it from [pypi](https://pypi.org/project/cluster_tools/), e.g. via pip: