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@@ -85,7 +92,7 @@ For upgrade instructions, please check the respective *Breaking Changes* section
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### Breaking Changes
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-`View`s now always open the `wkw.Dataset` lazily. All explicit calls to `View.open()` and `View.close()` must be removed. [#448](https://github.com/scalableminds/webknossos-libs/pull/448)
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### Added
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- Added a new Annotation class which includes skeletons as well as volume-annotations. [#452](https://github.com/scalableminds/webknossos-libs/pull/452)
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- Added dataset down- and upload as well as annotation download, see the examples `learned_segmenter.py` and `upload_image_data.py`. [#452](https://github.com/scalableminds/webknossos-libs/pull/452)
@@ -129,7 +135,7 @@ For upgrade instructions, please check the respective *Breaking Changes* section
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### Added
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### Changed
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- Avoid warnings for compressed/unaligned data, if the data is directly at the border of the bounding box. [#378](https://github.com/scalableminds/webknossos-cuber/pull/378)
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- Avoid warnings for compressed/unaligned data, if the data is directly at the border of the bounding box. [#378](https://github.com/scalableminds/webknossos-cuber/pull/378)
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### Fixed
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@@ -251,13 +257,13 @@ For upgrade instructions, please check the respective *Breaking Changes* section
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### Breaking Changes in Config & CLI
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- Some breaking changes in the dataset API: [#339](https://github.com/scalableminds/webknossos-cuber/pull/339)
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- The interfaces of the methods `Layer.add_mag` and `Layer.get_or_add_mag` have changed: the parameter `block_type` is now replaced with `compress`.
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- Previously `Layer.mags` was of type `Dict[str, MagView]`. This was now changed to `Dict[Mag, MagView]`.
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- The interfaces of the methods `Layer.add_mag` and `Layer.get_or_add_mag` have changed: the parameter `block_type` is now replaced with `compress`.
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- Previously `Layer.mags` was of type `Dict[str, MagView]`. This was now changed to `Dict[Mag, MagView]`.
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- Renamed `LayerTypes` to `LayerCategories`.
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### Added
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- Added multiple small features: [#339](https://github.com/scalableminds/webknossos-cuber/pull/339)
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- Names of datasets can now be passed optionally when creating a dataset.
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- Names of datasets can now be passed optionally when creating a dataset.
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- The `Layer` does now expose the `largest_segment_id`.
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- Add methods to get category specific layers for a given dataset.
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@@ -269,7 +275,7 @@ For upgrade instructions, please check the respective *Breaking Changes* section
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- Tiff-support is now dropped (`TiffDataset` and `TiledTiffDataset` are now removed (alongside their corresponding `Layer` and `MagDataset` classes))
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- Module names are now lowercase (previously: `wkcuber.api.Dataset`, `wkcuber.api.Layer`, `wkcuber.api.View`, `wkcuber.api.properties.DatasetProperties`, `wkcuber.api.properties.LayerProperties`, `wkcuber.api.properties.ResolutionProperties`)
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- Some classes are renamed (`WKDataset` -> `Dataset`, `WKMagDataset` -> `MagView`)
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- The "Layer types" (previously `Layer.COLOR` and `Layer.SEGMENTATION`) are now moved into their own class `wkcuber.api.layer.LayerTypes`.
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- The "Layer types" (previously `Layer.COLOR` and `Layer.SEGMENTATION`) are now moved into their own class `wkcuber.api.layer.LayerTypes`.
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-`View` (in particular `get_view()`) is refactored to be safer (this is also a breaking change).
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- The attribute `path_to_mag_dataset` was renamed to `path_to_mag_view`
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- Changes for `View.get_view()` (these changes also apply for `MagView.get_view()` (previously `MagDataset.get_view()`)):
@@ -278,7 +284,7 @@ For upgrade instructions, please check the respective *Breaking Changes* section
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- The order of the parameters `size` and `offset` was changed, so that `offset` is now the first parameter.
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- The shorthand `wkcuber.api.dataset.Dataset.get_view()` was removed.
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- The flag `--write_tiff` of `convert_nifti` was removed.
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### Added
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### Changed
@@ -367,4 +373,4 @@ For upgrade instructions, please check the respective *Breaking Changes* section
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