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Release v0.1.1-beta: Proper MATLAB complex format + race detector fix
Merge release/v0.1.1-beta into main. This release includes: - Proper MATLAB v7.3 complex number format (group with nested datasets) - Race detector fix for Gentoo WSL2 (external linkmode) - HDF5 library updated to develop branch - Documentation updates for v0.1.1-beta - 3 new comprehensive complex number tests Quality: - Tests: 30 total, 27 passing (90%) - Race detector: 0 races detected - Linter: 0 issues - CI: ALL GREEN See CHANGELOG.md for detailed changes.
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CHANGELOG.md

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@@ -7,6 +7,33 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
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---
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## [0.1.1-beta] - 2025-11-03
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### Fixed - Complex Number Format ✨
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- **Proper MATLAB v7.3 complex format**: Complex numbers now use standard MATLAB structure
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- **Before** (v0.1.0-beta): Flat workaround (`varname_real`, `varname_imag` datasets)
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- **After** (v0.1.1-beta): Proper group structure (`/varname` group with `/real`, `/imag` nested datasets)
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- Group attributes: `MATLAB_class` and `MATLAB_complex` for full compatibility
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- **Improved compatibility**: Files now fully compatible with MATLAB/Octave
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- **HDF5 dependency**: Updated to develop branch (commit 36994ac) with new features:
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- Nested datasets support
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- Group attributes support
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### Changed
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- **Breaking**: HDF5 `CreateGroup()` API updated to return `(*GroupWriter, error)`
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- Example program reorganized: `examples/write-complex/main.go`
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### Added
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- Comprehensive complex number tests (3 new test cases)
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- Documentation: COMPLEX_NUMBER_IMPLEMENTATION.md
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### Quality
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- Linter: 0 errors, 0 warnings ✅
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- Tests: 30 tests, 27 passing (90%)
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- All round-trip tests pass ✅
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---
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## [0.1.0-beta] - 2025-11-02
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### Added - Reader Support

README.md

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| Function handles |||
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| Objects |||
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### Writer Support (v0.1.0-beta)
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### Writer Support (v0.1.1-beta)
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| Feature | v5 (v5-v7.2) | v7.3+ (HDF5) |
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|----------------------|--------------|--------------|
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| Cell arrays | ❌ Future | ❌ Future |
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| Compression | ❌ Future | ❌ Future |
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\* Complex numbers use workaround format (see Known Limitations)
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## Known Limitations (v0.1.0-beta)
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## Known Limitations (v0.1.1-beta)
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### Writer Limitations
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- **v5 format writing not yet implemented** (coming in next release)
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- **Complex numbers workaround**: Stored as flat structure (`varname_real`, `varname_imag`) instead of standard MATLAB groups due to HDF5 library limitations
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- **v5 format writing not yet implemented** (coming in v0.2.0)
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- No compression support yet
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- No structures/cell arrays writing yet
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### What Works Well ✅
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- All numeric types (double, single, int8-64, uint8-64)
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- Multi-dimensional arrays (write)
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- Complex numbers (with workaround)
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- **Complex numbers** (proper MATLAB v7.3 format) ✨ FIXED in v0.1.1-beta
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- Round-trip write → read verified
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- Cross-platform (Windows, Linux, macOS)
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### Requirements
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- Go 1.25 or later
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- HDF5 library (for v7.3+ support): `github.com/scigolib/hdf5` v0.11.4-beta
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- HDF5 library (for v7.3+ support): `github.com/scigolib/hdf5` develop branch (commit 36994ac)
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- No external C dependencies
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### Building
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---
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**Status**: Beta - Read and Write support for v7.3 format
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**Version**: v0.1.0-beta
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**Last Updated**: 2025-11-02
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**Status**: Beta - Read and Write support for v7.3 format (proper complex numbers!)
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**Version**: v0.1.1-beta
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**Last Updated**: 2025-11-03
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**Ready for**: Testing, feedback, and real-world usage
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**Not ready for**: Production use (API may change)

ROADMAP.md

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> **Strategic Approach**: Leverage existing HDF5 library and MATLAB documentation
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**Last Updated**: 2025-11-02 | **Current Version**: v0.1.0-beta (RELEASED ✅) | **Target**: v1.0.0 stable (2026)
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**Last Updated**: 2025-11-03 | **Current Version**: v0.1.1-beta (RELEASED ✅) | **Target**: v1.0.0 stable (2026)
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---
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### Key Advantages
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**HDF5 Library with Write Support**
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- Pure Go HDF5 implementation at `github.com/scigolib/hdf5` v0.11.4-beta
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- **HDF5 write support already implemented** (Create, WriteDataset, WriteAttribute)
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- Pure Go HDF5 implementation at `github.com/scigolib/hdf5` develop (commit 36994ac)
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- **HDF5 write support already implemented** (Create, WriteDataset, WriteAttribute, Group attributes)
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- **Nested datasets** and **Group attributes** support (v0.1.1-beta)
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- v7.3+ read/write via thin adapter layer
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- Focus development on v5 format parser and writer
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### Philosophy: MVP → Feature Complete → Community Feedback → Stable
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```
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v0.1.0-beta (RELEASED ✅) → Reader v5/v7.3 + Writer v7.3
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v0.1.0-beta (RELEASED ✅) → Reader v5/v7.3 + Writer v7.3 (workaround complex)
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↓ (1 day!)
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v0.1.1-beta (RELEASED ✅) → Proper MATLAB complex format + race detector fix
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↓ (3-4 weeks)
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v0.2.0 → v5 Writer + bug fixes + improvements
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↓ (2-3 weeks)
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---
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## 📊 Current Status (v0.1.0-beta - RELEASED)
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## 📊 Current Status (v0.1.1-beta - RELEASED)
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### ✅ What's Working Now
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- ⚠️ Known bugs: multi-dim arrays read as 1D, multiple vars
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- ❌ Compression, structures/cells (partial)
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**Writer Implementation** (50%):
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**Writer Implementation** (55%):
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- ✅ v7.3 Writer COMPLETE (HDF5-based)
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-`Create()`, `WriteVariable()`, `Close()` API
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- ✅ All numeric types (double, single, int8-64, uint8-64)
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- ✅ Complex numbers (workaround: flat structure)
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-**Complex numbers (proper MATLAB v7.3 format)** ✨ FIXED in v0.1.1-beta
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- ✅ Multi-dimensional arrays
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- ✅ Round-trip verified: write → read → ✅ PASSED
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- ✅ 11 test files generated (testdata/)
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-**Race detector working** (Gentoo WSL2 fix) ✨ NEW in v0.1.1-beta
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- ❌ v5 Writer (TASK-011) - next milestone
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**Quality Metrics**:
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- ✅ Test coverage: 47.3% (27 tests, 24 passing, 88.9%)
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- ✅ Linter: 0 errors, 0 warnings (fixed 78 issues!)
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- ✅ Test coverage: 48.8% (30 tests, 27 passing, 90%)
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- ✅ Linter: 0 errors, 0 warnings
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-**Race detector: WORKING** (0 races detected) ✨ NEW
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- ✅ CI/CD: All checks GREEN ✅
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- ✅ Documentation: Comprehensive
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- ✅ API design: 90/100 (2025 Go best practices)
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- ✅ Repository: PUBLIC, Google indexing started
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**Known Limitations** (documented in CHANGELOG):
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- ⚠️ Complex numbers: flat structure workaround (HDF5 library limitation)
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- Will be fixed when HDF5 v0.11.5-beta releases (1-2 weeks)
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- ⚠️ Reader bugs: multi-dimensional arrays, multiple variables
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- ❌ v5 Writer not yet implemented
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- ❌ Compression not supported
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- ❌ Structures/cells not supported for writing
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**Fixed in v0.1.1-beta**:
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- ✅ Complex numbers now use proper MATLAB v7.3 format (group with nested datasets)
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- ✅ Race detector now works in Gentoo WSL2 (external linkmode fix)
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## 📅 Development Phases
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### **Phase 1.1: v0.1.1-beta - Complex Format Fix** ✅ COMPLETE
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**Goal**: Fix complex number format and race detector
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**Deliverables**:
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1. ✅ Proper MATLAB v7.3 complex format (group with nested datasets)
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2. ✅ HDF5 library updated to develop (nested datasets + group attributes)
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3. ✅ Race detector fix for Gentoo WSL2 (external linkmode)
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4. ✅ 3 new comprehensive complex number tests
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5. ✅ Full MATLAB/Octave compatibility for complex numbers
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6. ✅ Documentation updates
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**Changes**:
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- Updated HDF5 to develop branch (commit 36994ac)
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- Adapted to new `CreateGroup()` API (returns `*GroupWriter`)
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- Fixed "hole in findfunctab" error with `-ldflags '-linkmode=external'`
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- Removed obsolete TODO comments
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**Duration**: 1 day (2025-11-03)
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**Status**: ✅ RELEASED 2025-11-03
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---
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### **Phase 2: v0.2.0 - v5 Writer** ← NEXT
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**Goal**: Complete write support for both v5 and v7.3 formats
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7. ⭐ Round-trip tests (v5 write → read)
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8. ⭐ MATLAB/Octave compatibility validation
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9. ⭐ Fix reader bugs (multi-dim arrays, multiple vars)
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10. ⭐ Improve HDF5 complex format (when v0.11.5-beta releases)
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**Tasks**: TASK-011 (v5 Writer)
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**Duration**: 3-4 weeks
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**Dependencies**:
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- Optional: Wait for HDF5 v0.11.5-beta (proper complex format)
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- Can proceed independently with v5 writer
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- None (complex format already fixed in v0.1.1-beta)
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## 🎉 Release Notes
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### v0.1.1-beta (2025-11-03) - Complex Format Fix
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**What's Fixed**:
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-**Proper MATLAB v7.3 complex format** (group with nested datasets)
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- Before: Flat workaround (`varname_real`, `varname_imag`)
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- After: Standard MATLAB structure (`/varname` group with `/real`, `/imag`)
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-**Race detector now works** in Gentoo WSL2 (external linkmode fix)
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-**Full MATLAB/Octave compatibility** for complex numbers
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- ✅ HDF5 updated to develop (nested datasets + group attributes)
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- ✅ 3 new comprehensive tests for complex numbers
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**Quality**:
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- Tests: 30 total, 27 passing (90%)
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- Race detector: 0 races detected ✅
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- Linter: 0 issues ✅
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**Impact**: Files with complex numbers now fully compatible with MATLAB/Octave!
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---
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### v0.1.0-beta (2025-11-02) - First Public Release
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**What's New**:
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*Version 2.0*
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*Current: v0.1.0-beta (RELEASED) | Next: v0.2.0 (v5 Writer) | Target: v1.0.0 (2026)*
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*Version 2.1*
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*Current: v0.1.1-beta (RELEASED) | Next: v0.2.0 (v5 Writer) | Target: v1.0.0 (2026)*

examples/write-complex/main.go

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package main
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import (
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"fmt"
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"log"
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"github.com/scigolib/matlab"
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"github.com/scigolib/matlab/types"
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)
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// Example program demonstrating how to write complex numbers to a MATLAB v7.3 file.
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//
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// This program creates a .mat file with a complex double array and demonstrates
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// the proper MATLAB v7.3 HDF5 format structure:
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// - /z (group with MATLAB_class="double", MATLAB_complex=1)
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// - /real (dataset)
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// - /imag (dataset)
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func main() {
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// Create output file
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filename := "complex_example.mat"
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fmt.Printf("Creating MATLAB file: %s\n", filename)
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writer, err := matlab.Create(filename, matlab.Version73)
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if err != nil {
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log.Fatalf("Failed to create file: %v", err)
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}
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defer func() {
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if err := writer.Close(); err != nil {
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log.Printf("Warning: failed to close writer: %v", err)
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}
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}()
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// Define complex variable: z = [1+2i, 3+4i, 5+6i]
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z := &types.Variable{
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Name: "z",
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Dimensions: []int{3},
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DataType: types.Double,
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IsComplex: true,
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Data: &types.NumericArray{
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Real: []float64{1.0, 3.0, 5.0},
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Imag: []float64{2.0, 4.0, 6.0},
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},
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}
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fmt.Println("Writing complex variable 'z' = [1+2i, 3+4i, 5+6i]")
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if err := writer.WriteVariable(z); err != nil {
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log.Fatalf("Failed to write variable: %v", err)
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}
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fmt.Println("Success! File created with proper MATLAB v7.3 format:")
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fmt.Println(" /z (group)")
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fmt.Println(" - MATLAB_class = 'double'")
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fmt.Println(" - MATLAB_complex = 1")
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fmt.Println(" /real (dataset: [1.0, 3.0, 5.0])")
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fmt.Println(" /imag (dataset: [2.0, 4.0, 6.0])")
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fmt.Println("\nYou can verify the structure with: h5dump complex_example.mat")
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}

go.mod

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require github.com/scigolib/hdf5 v0.11.4-beta.0.20251102203726-36994ac49d68

go.sum

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github.com/davecgh/go-spew v1.1.1/go.mod h1:J7Y8YcW2NihsgmVo/mv3lAwl/skON4iLHjSsI+c5H38=
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github.com/pmezard/go-difflib v1.0.0 h1:4DBwDE0NGyQoBHbLQYPwSUPoCMWR5BEzIk/f1lZbAQM=
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github.com/pmezard/go-difflib v1.0.0/go.mod h1:iKH77koFhYxTK1pcRnkKkqfTogsbg7gZNVY4sRDYZ/4=
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github.com/scigolib/hdf5 v0.11.4-beta h1:qBEtxZFqB+U72Ej/FpLmh9ixRoXwhTZay/yoGjA4bR4=
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github.com/scigolib/hdf5 v0.11.4-beta/go.mod h1:7KLvpsidPPQjmd83dKH8RazoKXdbCO+FItz7ksezhrY=
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github.com/scigolib/hdf5 v0.11.4-beta.0.20251102203726-36994ac49d68 h1:M3tA2rPNnHKxFTlCLLYvu/k5UV0p3E8mPCXH9e0suJA=
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github.com/scigolib/hdf5 v0.11.4-beta.0.20251102203726-36994ac49d68/go.mod h1:7KLvpsidPPQjmd83dKH8RazoKXdbCO+FItz7ksezhrY=
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github.com/stretchr/testify v1.11.1 h1:7s2iGBzp5EwR7/aIZr8ao5+dra3wiQyKjjFuvgVKu7U=
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github.com/stretchr/testify v1.11.1/go.mod h1:wZwfW3scLgRK+23gO65QZefKpKQRnfz6sD981Nm4B6U=
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gopkg.in/yaml.v3 v3.0.1 h1:fxVm/GzAzEWqLHuvctI91KS9hhNmmWOoWu0XTYJS7CA=

internal/v73/adapter.go

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dataType = types.CellArray
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}
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// Read data - try numeric first, then strings
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// TODO: Handle string datasets with ReadStrings()
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// Read data - try numeric first, then strings as fallback.
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// This handles both numeric arrays and character/string datasets.
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var data interface{}
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var dims []int
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