Merge pull request #622 from scipp/copier-update

Copier update

Author: jl-wynen

.buildconfig/ci-linux.yml

@@ -35,7 +35,7 @@ dependencies:
   # docs
   - myst-parser==4.0.0
   - nbsphinx==0.9.5
-  - packaging==24.1
+  - packaging==25.0
   - pandoc==3.4.0
   - pydata-sphinx-theme==0.16.0
   - sphinx==8.1.3

.copier-answers.yml

@@ -1,5 +1,5 @@
 # Changes here will be overwritten by Copier; NEVER EDIT MANUALLY
-_commit: 18e7005
+_commit: 3f79959
 _src_path: gh:scipp/copier_template
 description: Neutron scattering tools for Data Reduction
 max_python: '3.13'

.github/workflows/release.yml

@@ -68,7 +68,7 @@ jobs:
     if: github.event_name == 'release' && github.event.action == 'published'
     steps:
       - uses: actions/download-artifact@v4
-      - uses: pypa/gh-action-pypi-publish@v1.8.14
+      - uses: pypa/gh-action-pypi-publish@v1.12.4
 
   upload_conda:
     name: Deploy Conda

.gitignore

@@ -14,6 +14,7 @@ venv
 .venv
 
 # Caches
+*.DS_Store
 .clangd/
 *.ipynb_checkpoints
 __pycache__/

.pre-commit-config.yaml

@@ -23,7 +23,7 @@ repos:
         args: [ "--drop-empty-cells",
                 "--extra-keys 'metadata.language_info.version cell.metadata.jp-MarkdownHeadingCollapsed cell.metadata.pycharm'" ]
   - repo: https://github.com/astral-sh/ruff-pre-commit
-    rev: v0.9.10
+    rev: v0.11.8
     hooks:
       - id: ruff
         args: [ --fix ]

docs/conf.py

@@ -293,10 +293,11 @@ def do_not_plot(*args, **kwargs):
     'https://github.com/scipp/scipp/pull/[0-9]+',
     # This returns '403 Forbidden' but the link works in a browser.
     'https://opensource.org/licenses/BSD-3-Clause',
-    # This returns '403 Forbidden' but the link works in a browser.
-    'https://doi.org/10.1080/10448639208218770',
     # We get 403 Forbidden for this for some reason; works in a browser, though.
     'https://support.orcid.org/hc/en-us/articles/360006897674-Structure-of-the-ORCID-Identifier',
+    # Linkcheck seems to be denied access by some DOI resolvers.
+    # Since DOIs are supposed to be permanent, we don't need to check them.'
+    r'https://doi\.org/',
 ]
 
 # -- Options for bibtex ---------------------------------------------------

docs/index.md

@@ -1,17 +1,40 @@
-# ScippNeutron
+:::{image} _static/logo.svg
+:class: only-light
+:alt: ScippNeutron
+:width: 60%
+:align: center
+:::
+:::{image} _static/logo-dark.svg
+:class: only-dark
+:alt: ScippNeutron
+:width: 60%
+:align: center
+:::
+
+```{raw} html
+   <style>
+    .transparent {display: none; visibility: hidden;}
+    .transparent + a.headerlink {display: none; visibility: hidden;}
+   </style>
+```
+
+```{role} transparent
+```
+
+# {transparent}`ScippNeutron`
 
-<span style="font-size:1.2em;font-style:italic;color:#5a5a5a">
-  Neutron scattering tools for Data Reduction powered by Scipp.
+<div style="font-size:1.2em;font-style:italic;color:var(--pst-color-text-muted);text-align:center;">
+  Neutron scattering tools for Data Reduction
   </br></br>
-</span>
+</div>
 
 :::{include} user-guide/installation.md
 :heading-offset: 1
 :::
 
 ## Get in touch
 
-- If you have questions that are not answered by these documentation pages, ask on [GitHub discussions](https://github.com/orgs/scipp/discussions). Please include a self-contained reproducible example if possible.
+- If you have questions that are not answered by these documentation pages, ask on [discussions](https://github.com/scipp/scippneutron/discussions). Please include a self-contained reproducible example if possible.
 - Report bugs (including unclear, missing, or wrong documentation!), suggest features or view the source code [on GitHub](https://github.com/scipp/scippneutron).
 
 ```{toctree}

docs/user-guide/index.md

@@ -1,6 +1,10 @@
 # User Guide
 
 ```{toctree}
+---
+maxdepth: 1
+---
+
 installation
 chopper/index
 coordinate-transformations
@@ -12,3 +16,4 @@ masking-tool
 algorithms-background/index
 absorption-correction
 ```
+

pyproject.toml

@@ -1,6 +1,6 @@
 [build-system]
 requires = [
-  "setuptools>=68",
+  "setuptools>=77",
   "setuptools_scm[toml]>=8.0",
 ]
 build-backend = "setuptools.build_meta"
@@ -9,11 +9,11 @@ build-backend = "setuptools.build_meta"
 name = "scippneutron"
 description = "Neutron scattering tools for Data Reduction"
 authors = [{ name = "Scipp contributors" }]
-license = { file = "LICENSE" }
+license = "BSD-3-Clause"
+license-files = ["LICENSE"]
 readme = "README.md"
 classifiers = [
     "Intended Audience :: Science/Research",
-    "License :: OSI Approved :: BSD License",
     "Natural Language :: English",
     "Operating System :: OS Independent",
     "Programming Language :: Python :: 3",

requirements/base.txt

@@ -44,7 +44,7 @@ numpy==2.2.3
     #   mpltoolbox
     #   scipp
     #   scipy
-packaging==24.2
+packaging==25.0
     # via
     #   lazy-loader
     #   matplotlib