Merge pull request #610 from scipp/update-deps

Update dependencies and pre-commit hooks

Author: jl-wynen

.pre-commit-config.yaml

@@ -16,22 +16,22 @@ repos:
         args: [ --markdown-linebreak-ext=md ]
         exclude: '\.svg'
   - repo: https://github.com/kynan/nbstripout
-    rev: 0.7.1
+    rev: 0.8.1
     hooks:
       - id: nbstripout
         types: [ "jupyter" ]
         args: [ "--drop-empty-cells",
                 "--extra-keys 'metadata.language_info.version cell.metadata.jp-MarkdownHeadingCollapsed cell.metadata.pycharm'" ]
   - repo: https://github.com/astral-sh/ruff-pre-commit
-    rev: v0.8.0
+    rev: v0.9.10
     hooks:
       - id: ruff
         args: [ --fix ]
         types_or: [ python, pyi, jupyter ]
       - id: ruff-format
         types_or: [ python, pyi ]
   - repo: https://github.com/codespell-project/codespell
-    rev: v2.3.0
+    rev: v2.4.1
     hooks:
       - id: codespell
         additional_dependencies:
@@ -47,7 +47,7 @@ repos:
       - id: rst-inline-touching-normal
       - id: text-unicode-replacement-char
   - repo: https://github.com/rhysd/actionlint
-    rev: v1.7.3
+    rev: v1.7.7
     hooks:
       - id: actionlint
         # Disable because of false-positive SC2046

requirements/base.txt

@@ -1,4 +1,4 @@
-# SHA1:0d828cbacfc7cf912a961c413fba99e70fc9dde0
+# SHA1:a27fe80e794a66dbedb9ec12032e8412ba2163b8
 #
 # This file is autogenerated by pip-compile-multi
 # To update, run:
@@ -29,7 +29,7 @@ lazy-loader==0.4
     # via
     #   -r base.in
     #   plopp
-matplotlib==3.10.0
+matplotlib==3.10.1
     # via
     #   mpltoolbox
     #   plopp

requirements/basetest.txt

@@ -11,8 +11,6 @@ asttokens==3.0.0
     # via stack-data
 attrs==25.1.0
     # via hypothesis
-brille==0.8.0
-    # via pace-neutrons
 certifi==2025.1.31
     # via requests
 charset-normalizer==3.4.1
@@ -25,9 +23,9 @@ cyclebane==24.10.0
     # via sciline
 cycler==0.12.1
     # via matplotlib
-decorator==5.1.1
+decorator==5.2.1
     # via ipython
-euphonic[phonopy-reader]==1.4.1
+euphonic[phonopy-reader]==1.4.2
     # via pace-neutrons
 exceptiongroup==1.2.2
     # via
@@ -46,17 +44,17 @@ fonttools==4.56.0
     # via matplotlib
 h5py==3.13.0
     # via euphonic
-hypothesis==6.126.0
+hypothesis==6.128.2
     # via -r basetest.in
 idna==3.10
     # via requests
 iniconfig==2.0.0
     # via pytest
 ipydatawidgets==4.3.5
     # via pythreejs
-ipympl==0.9.6
+ipympl==0.9.7
     # via -r basetest.in
-ipython==8.32.0
+ipython==8.34.0
     # via
     #   ipympl
     #   ipywidgets
@@ -72,9 +70,9 @@ jupyterlab-widgets==3.0.13
     # via ipywidgets
 kiwisolver==1.4.8
     # via matplotlib
-libpymcr==0.1.8
+libpymcr==0.2.1
     # via pace-neutrons
-matplotlib==3.10.0
+matplotlib==3.10.1
     # via
     #   ipympl
     #   pace-neutrons
@@ -84,7 +82,6 @@ networkx==3.4.2
     # via cyclebane
 numpy==2.2.3
     # via
-    #   brille
     #   contourpy
     #   euphonic
     #   h5py
@@ -97,7 +94,7 @@ numpy==2.2.3
     #   scipy
     #   seekpath
     #   spglib
-pace-neutrons==0.3.1
+pace-neutrons==0.4.0
     # via -r basetest.in
 packaging==24.2
     # via
@@ -137,7 +134,7 @@ pygments==2.19.1
     # via ipython
 pyparsing==3.2.1
     # via matplotlib
-pytest==8.3.4
+pytest==8.3.5
     # via
     #   -r basetest.in
     #   pytest-xdist
@@ -165,7 +162,7 @@ six==1.17.0
     #   python-dateutil
 sortedcontainers==2.4.0
     # via hypothesis
-spglib==2.5.0
+spglib==2.6.0
     # via
     #   euphonic
     #   seekpath
@@ -194,6 +191,7 @@ typing-extensions==4.12.2
     #   flexparser
     #   ipython
     #   pint
+    #   spglib
 urllib3==2.3.0
     # via requests
 wcwidth==0.2.13

requirements/ci.txt

@@ -5,7 +5,7 @@
 #
 #    pip-compile-multi
 #
-cachetools==5.5.1
+cachetools==5.5.2
     # via tox
 certifi==2025.1.31
     # via requests
@@ -48,11 +48,11 @@ tomli==2.2.1
     # via
     #   pyproject-api
     #   tox
-tox==4.24.1
+tox==4.24.2
     # via -r ci.in
 typing-extensions==4.12.2
     # via tox
 urllib3==2.3.0
     # via requests
-virtualenv==20.29.2
+virtualenv==20.29.3
     # via tox

requirements/dev.txt

@@ -30,7 +30,7 @@ click==8.1.8
     # via
     #   pip-compile-multi
     #   pip-tools
-copier==9.5.0
+copier==9.6.0
     # via -r dev.in
 dunamai==1.23.0
     # via copier
@@ -79,7 +79,7 @@ overrides==7.7.0
     # via jupyter-server
 pathspec==0.12.1
     # via copier
-pip-compile-multi==2.7.1
+pip-compile-multi==2.8.0
     # via -r dev.in
 pip-tools==7.4.1
     # via pip-compile-multi
@@ -89,7 +89,7 @@ prometheus-client==0.21.1
     # via jupyter-server
 pycparser==2.22
     # via cffi
-python-json-logger==3.2.1
+python-json-logger==3.3.0
     # via jupyter-events
 questionary==2.1.0
     # via copier
@@ -115,7 +115,7 @@ types-docutils==0.21.0.20241128
     # via -r dev.in
 types-python-dateutil==2.9.0.20241206
     # via arrow
-types-requests==2.32.0.20241016
+types-requests==2.32.0.20250306
     # via -r dev.in
 uri-template==1.3.0
     # via jsonschema

requirements/docs.txt

@@ -34,9 +34,9 @@ comm==0.2.2
     # via
     #   ipykernel
     #   ipywidgets
-debugpy==1.8.12
+debugpy==1.8.13
     # via ipykernel
-decorator==5.1.1
+decorator==5.2.1
     # via ipython
 defusedxml==0.7.1
     # via nbconvert
@@ -60,9 +60,9 @@ importlib-resources==6.5.2
     # via tof
 ipykernel==6.29.5
     # via -r docs.in
-ipympl==0.9.6
+ipympl==0.9.7
     # via -r docs.in
-ipython==8.32.0
+ipython==8.34.0
     # via
     #   -r docs.in
     #   ipykernel
@@ -72,7 +72,7 @@ ipywidgets==8.1.5
     # via ipympl
 jedi==0.19.2
     # via ipython
-jinja2==3.1.5
+jinja2==3.1.6
     # via
     #   myst-parser
     #   nbconvert
@@ -128,7 +128,7 @@ nbformat==5.10.4
     #   nbclient
     #   nbconvert
     #   nbsphinx
-nbsphinx==0.9.6
+nbsphinx==0.9.7
     # via -r docs.in
 nest-asyncio==1.6.0
     # via ipykernel
@@ -183,7 +183,7 @@ requests==2.32.3
     # via
     #   pooch
     #   sphinx
-rpds-py==0.22.3
+rpds-py==0.23.1
     # via
     #   jsonschema
     #   referencing

requirements/nightly.txt

@@ -1,4 +1,4 @@
-# SHA1:35082b8a19e40445e6769ac7c2dbc62a17d61e0a
+# SHA1:80074c06e57dfdeb2296268e18f7298503601250
 #
 # This file is autogenerated by pip-compile-multi
 # To update, run:
@@ -8,14 +8,14 @@
 --index-url https://pypi.anaconda.org/scipp-nightly-wheels/simple/
 --extra-index-url https://pypi.org/simple
 
+annotated-types==0.7.0
+    # via pydantic
 appdirs==1.4.4
     # via pace-neutrons
 asttokens==3.0.0
     # via stack-data
 attrs==25.1.0
     # via hypothesis
-brille==0.8.0
-    # via pace-neutrons
 certifi==2025.1.31
     # via requests
 charset-normalizer==3.4.1
@@ -28,9 +28,13 @@ cyclebane==24.10.0
     # via sciline
 cycler==0.12.1
     # via matplotlib
-decorator==5.1.1
+decorator==5.2.1
     # via ipython
-euphonic[phonopy-reader]==1.4.1
+dnspython==2.7.0
+    # via email-validator
+email-validator==2.2.0
+    # via -r nightly.in
+euphonic[phonopy-reader]==1.4.2
     # via pace-neutrons
 exceptiongroup==1.2.2
     # via
@@ -52,19 +56,21 @@ h5py==3.13.0
     #   -r nightly.in
     #   euphonic
     #   scippnexus
-hypothesis==6.126.0
+hypothesis==6.128.2
     # via -r nightly.in
 idna==3.10
-    # via requests
+    # via
+    #   email-validator
+    #   requests
 importlib-resources==6.5.2
     # via tof
 iniconfig==2.0.0
     # via pytest
 ipydatawidgets==4.3.5
     # via pythreejs
-ipympl==0.9.6
+ipympl==0.9.7
     # via -r nightly.in
-ipython==8.32.0
+ipython==8.34.0
     # via
     #   ipympl
     #   ipywidgets
@@ -84,9 +90,9 @@ lazy-loader==0.4
     # via
     #   -r nightly.in
     #   plopp
-libpymcr==0.1.8
+libpymcr==0.2.1
     # via pace-neutrons
-matplotlib==3.10.0
+matplotlib==3.10.1
     # via
     #   ipympl
     #   mpltoolbox
@@ -101,7 +107,6 @@ networkx==3.4.2
 numpy==2.2.3
     # via
     #   -r nightly.in
-    #   brille
     #   contourpy
     #   euphonic
     #   h5py
@@ -116,7 +121,7 @@ numpy==2.2.3
     #   scipy
     #   seekpath
     #   spglib
-pace-neutrons==0.3.1
+pace-neutrons==0.4.0
     # via -r nightly.in
 packaging==24.2
     # via
@@ -157,18 +162,23 @@ ptyprocess==0.7.0
     # via pexpect
 pure-eval==0.2.3
     # via stack-data
+pydantic==2.11.0b1
+    # via -r nightly.in
+pydantic-core==2.31.1
+    # via pydantic
 pygments==2.19.1
     # via ipython
 pyparsing==3.2.1
     # via matplotlib
-pytest==8.3.4
+pytest==8.3.5
     # via
     #   -r nightly.in
     #   pytest-xdist
 pytest-xdist==3.6.1
     # via -r nightly.in
 python-dateutil==2.9.0.post0
     # via
+    #   -r nightly.in
     #   matplotlib
     #   scippnexus
 pythreejs==2.4.2
@@ -202,7 +212,7 @@ six==1.17.0
     #   python-dateutil
 sortedcontainers==2.4.0
     # via hypothesis
-spglib==2.5.0
+spglib==2.6.0
     # via
     #   euphonic
     #   seekpath
@@ -233,6 +243,12 @@ typing-extensions==4.12.2
     #   flexparser
     #   ipython
     #   pint
+    #   pydantic
+    #   pydantic-core
+    #   spglib
+    #   typing-inspection
+typing-inspection==0.4.0
+    # via pydantic
 urllib3==2.3.0
     # via requests
 wcwidth==0.2.13