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| 1 | +# defined in scipy/spatial/src/distance_wrap.c |
| 2 | + |
| 3 | +from typing import TypeAlias |
| 4 | + |
| 5 | +import numpy as np |
| 6 | +import optype.numpy as onp |
| 7 | + |
| 8 | +_DoubleND: TypeAlias = onp.ArrayND[np.float64] |
| 9 | +_Double1D: TypeAlias = onp.Array1D[np.float64] |
| 10 | +_Double2D: TypeAlias = onp.Array2D[np.float64] |
| 11 | +_BoolND: TypeAlias = onp.ArrayND[np.bool_] |
| 12 | +_Bool1D: TypeAlias = onp.Array1D[np.bool_] |
| 13 | +_Bool2D: TypeAlias = onp.Array2D[np.bool_] |
| 14 | + |
| 15 | +### |
| 16 | +# NOTE: These all return 0.0, and write the result to `dm`. |
| 17 | + |
| 18 | +def cdist_braycurtis_double_wrap(XA: _DoubleND, XB: _DoubleND, dm: _DoubleND) -> float: ... |
| 19 | +def cdist_canberra_double_wrap(XA: _DoubleND, XB: _DoubleND, dm: _DoubleND) -> float: ... |
| 20 | +def cdist_chebyshev_double_wrap(XA: _DoubleND, XB: _DoubleND, dm: _DoubleND) -> float: ... |
| 21 | +def cdist_cityblock_double_wrap(XA: _DoubleND, XB: _DoubleND, dm: _DoubleND) -> float: ... |
| 22 | +def cdist_cosine_double_wrap(XA: _DoubleND, XB: _DoubleND, dm: _DoubleND) -> float: ... |
| 23 | +def cdist_euclidean_double_wrap(XA: _DoubleND, XB: _DoubleND, dm: _DoubleND) -> float: ... |
| 24 | +def cdist_hamming_double_wrap(XA: _DoubleND, XB: _DoubleND, dm: _DoubleND, w: _DoubleND) -> float: ... |
| 25 | +def cdist_jaccard_double_wrap(XA: _DoubleND, XB: _DoubleND, dm: _DoubleND) -> float: ... |
| 26 | +def cdist_jensenshannon_double_wrap(XA: _DoubleND, XB: _DoubleND, dm: _DoubleND) -> float: ... |
| 27 | +def cdist_mahalanobis_double_wrap(XA: _DoubleND, XB: _DoubleND, dm: _DoubleND, VI: _DoubleND) -> float: ... |
| 28 | +def cdist_minkowski_double_wrap(XA: _DoubleND, XB: _DoubleND, dm: _DoubleND, p: float) -> float: ... |
| 29 | +def cdist_seuclidean_double_wrap(XA: _DoubleND, XB: _DoubleND, dm: _DoubleND, V: _DoubleND) -> float: ... |
| 30 | +def cdist_sqeuclidean_double_wrap(XA: _DoubleND, XB: _DoubleND, dm: _DoubleND) -> float: ... |
| 31 | +def cdist_weighted_chebyshev_double_wrap(XA: _DoubleND, XB: _DoubleND, dm: _DoubleND, w: _DoubleND) -> float: ... |
| 32 | +def cdist_weighted_minkowski_double_wrap(XA: _DoubleND, XB: _DoubleND, dm: _DoubleND, p: float, w: _DoubleND) -> float: ... |
| 33 | + |
| 34 | +# |
| 35 | +def cdist_dice_bool_wrap(XA: _BoolND, XB: _BoolND, dm: _DoubleND) -> float: ... |
| 36 | +def cdist_hamming_bool_wrap(XA: _BoolND, XB: _BoolND, dm: _DoubleND, w: _DoubleND) -> float: ... |
| 37 | +def cdist_jaccard_bool_wrap(XA: _BoolND, XB: _BoolND, dm: _DoubleND) -> float: ... |
| 38 | +def cdist_kulczynski1_bool_wrap(XA: _BoolND, XB: _BoolND, dm: _DoubleND) -> float: ... |
| 39 | +def cdist_rogerstanimoto_bool_wrap(XA: _BoolND, XB: _BoolND, dm: _DoubleND) -> float: ... |
| 40 | +def cdist_russellrao_bool_wrap(XA: _BoolND, XB: _BoolND, dm: _DoubleND) -> float: ... |
| 41 | +def cdist_sokalmichener_bool_wrap(XA: _BoolND, XB: _BoolND, dm: _DoubleND) -> float: ... |
| 42 | +def cdist_sokalsneath_bool_wrap(XA: _BoolND, XB: _BoolND, dm: _DoubleND) -> float: ... |
| 43 | +def cdist_yule_bool_wrap(XA: _BoolND, XB: _BoolND, dm: _DoubleND) -> float: ... |
| 44 | + |
| 45 | +# |
| 46 | +def pdist_braycurtis_double_wrap(X: _Double2D, dm: _Double2D, /) -> float: ... |
| 47 | +def pdist_canberra_double_wrap(X: _Double2D, dm: _Double2D, /) -> float: ... |
| 48 | +def pdist_chebyshev_double_wrap(X: _Double2D, dm: _Double2D, /) -> float: ... |
| 49 | +def pdist_cityblock_double_wrap(X: _Double2D, dm: _Double2D, /) -> float: ... |
| 50 | +def pdist_cosine_double_wrap(X: _Double2D, dm: _Double2D) -> float: ... |
| 51 | +def pdist_euclidean_double_wrap(X: _Double2D, dm: _Double2D, /) -> float: ... |
| 52 | +def pdist_hamming_double_wrap(X: _Double2D, dm: _Double2D, w: _DoubleND) -> float: ... |
| 53 | +def pdist_jaccard_double_wrap(X: _Double2D, dm: _Double2D, /) -> float: ... |
| 54 | +def pdist_jensenshannon_double_wrap(X: _Double2D, dm: _Double2D, /) -> float: ... |
| 55 | +def pdist_mahalanobis_double_wrap(X: _Double2D, dm: _Double2D, VI: _Double2D) -> float: ... |
| 56 | +def pdist_minkowski_double_wrap(X: _Double2D, dm: _Double2D, p: float) -> float: ... |
| 57 | +def pdist_seuclidean_double_wrap(X: _Double2D, dm: _Double2D, V: _DoubleND) -> float: ... |
| 58 | +def pdist_sqeuclidean_double_wrap(X: _Double2D, dm: _Double2D, /) -> float: ... |
| 59 | +def pdist_weighted_chebyshev_double_wrap(X: _Double2D, dm: _Double2D, w: _DoubleND) -> float: ... |
| 60 | +def pdist_weighted_minkowski_double_wrap(X: _Double2D, dm: _Double2D, p: float, w: _DoubleND) -> float: ... |
| 61 | + |
| 62 | +# |
| 63 | +def pdist_dice_bool_wrap(X: _Bool2D, dm: _Double2D, /) -> float: ... |
| 64 | +def pdist_hamming_bool_wrap(X: _Bool2D, dm: _Double2D, w: _DoubleND) -> float: ... |
| 65 | +def pdist_jaccard_bool_wrap(X: _Bool2D, dm: _Double2D, /) -> float: ... |
| 66 | +def pdist_kulczynski1_bool_wrap(X: _Bool2D, dm: _Double2D, /) -> float: ... |
| 67 | +def pdist_rogerstanimoto_bool_wrap(X: _Bool2D, dm: _Double2D, /) -> float: ... |
| 68 | +def pdist_russellrao_bool_wrap(X: _Bool2D, dm: _Double2D, /) -> float: ... |
| 69 | +def pdist_sokalmichener_bool_wrap(X: _Bool2D, dm: _Double2D, /) -> float: ... |
| 70 | +def pdist_sokalsneath_bool_wrap(X: _Bool2D, dm: _Double2D, /) -> float: ... |
| 71 | +def pdist_yule_bool_wrap(X: _Bool2D, dm: _Double2D, /) -> float: ... |
| 72 | + |
| 73 | +### |
| 74 | + |
| 75 | +def to_squareform_from_vector_wrap(M: _Double2D | _Bool2D, v: _Double1D | _Bool1D, /) -> None: ... |
| 76 | +def to_vector_from_squareform_wrap(M: _Double2D | _Bool2D, v: _Double1D | _Bool1D, /) -> None: ... |
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