[pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

Author: pre-commit-ci[bot]

notebooks/examples/napari_rois.ipynb

@@ -1143,9 +1143,7 @@
     "\n",
     "for shape in [\"lasso\", \"my_shapes\", \"my_shapes_2\"]:\n",
     "    for polygon in visium_sdata[shape].geometry:\n",
-    "        table = polygon_query(\n",
-    "            visium_sdata, polygon=polygon, target_coordinate_system=\"aligned\"\n",
-    "        )[\"table\"]\n",
+    "        table = polygon_query(visium_sdata, polygon=polygon, target_coordinate_system=\"aligned\")[\"table\"]\n",
     "        filtered_tables_unmerged[shape].append(table)\n",
     "    filtered_tables[shape] = ad.concat(filtered_tables_unmerged[shape])"
    ]
@@ -1302,9 +1300,7 @@
     "categories = [\"unassigned\"] + list(filtered_tables.keys())\n",
     "n = len(visium_sdata[\"table\"])\n",
     "\n",
-    "visium_sdata[\"table\"].obs[\"annotation\"] = pd.Categorical(\n",
-    "    [\"unassigned\" for _ in range(n)], categories=categories\n",
-    ")\n",
+    "visium_sdata[\"table\"].obs[\"annotation\"] = pd.Categorical([\"unassigned\" for _ in range(n)], categories=categories)\n",
     "\n",
     "for shape, subtable in filtered_tables.items():\n",
     "    in_shape = subtable.obs.index\n",
@@ -1389,9 +1385,8 @@
     "plt.figure(figsize=(12, 7))\n",
     "ax = plt.gca()\n",
     "(\n",
-    "    visium_sdata.pl.render_images(\n",
-    "        \"CytAssist_FFPE_Human_Breast_Cancer_full_image\"\n",
-    "    ).pl.render_shapes(\"CytAssist_FFPE_Human_Breast_Cancer\", color=\"annotation\")\n",
+    "    visium_sdata.pl.render_images(\"CytAssist_FFPE_Human_Breast_Cancer_full_image\")\n",
+    "    .pl.render_shapes(\"CytAssist_FFPE_Human_Breast_Cancer\", color=\"annotation\")\n",
     "    # .pl.render_shapes(\"lasso\", color=\"#00000040\")\n",
     "    # .pl.render_shapes(\"my_shapes\", color=\"#00000040\")\n",
     "    # .pl.render_shapes(\"my_shapes_2\", color=\"#00000040\")\n",