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Visit our `documentation`_ for installation, tutorials, examples and more.
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Squidpy is part of the scverse project (`website`_, `governance`_) and is fiscally sponsored by `NumFOCUS`_.
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Please consider making a tax-deductible `donation`_ to help the project pay for developer time, professional services, travel, workshops, and a variety of other needs.
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|NumFOCUS logo|
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Manuscript
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Please see our manuscript `Palla, Spitzer et al. (2022)`_ in **Nature Methods** to learn more.
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.. _Palla, Spitzer et al. (2022): https://doi.org/10.1038/s41592-021-01358-2
Squidpy is part of the scverse® project (`website`_, `governance`_) and is fiscally sponsored by `NumFOCUS`_.
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Please consider making a tax-deductible `donation`_ to help the project pay for developer time, professional services, travel, workshops, and a variety of other needs.
**Squidpy** is a tool for the analysis and visualization of spatial molecular data.
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It builds on top of `scanpy`_ and `anndata`_, from which it inherits modularity and scalability.
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If you are new to SpatialData, we invite you to take a look at the documentation `here <https://spatialdata.scverse.org/en/latest/tutorials/notebooks/notebooks.html>`_.
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Squidpy is part of the scverse® project (`website`_, `governance`_) and is fiscally sponsored by `NumFOCUS`_.
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Please consider making a tax-deductible `donation`_ to help the project pay for developer time, professional services, travel, workshops, and a variety of other needs.
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