python312Packages.numpydoc: cleanup and skip failing tests (NixOS#379945)

Author: NickCao

pkgs/development/python-modules/numpydoc/default.nix

@@ -2,52 +2,55 @@
   lib,
   buildPythonPackage,
   fetchPypi,
-  isPy27,
+
+  # build-system
   setuptools,
+
+  # dependencies
   jinja2,
   sphinx,
   tabulate,
-  pytestCheckHook,
+
+  # tests
   matplotlib,
+  pytest-cov-stub,
+  pytestCheckHook,
 }:
 
 buildPythonPackage rec {
   pname = "numpydoc";
   version = "1.8.0";
   pyproject = true;
 
-  disabled = isPy27;
-
   src = fetchPypi {
     inherit pname;
     inherit version;
     hash = "sha256-AiOQq3RkpE+HN/efizHOHTz6S0r3nMqhqsXoNo21h/s=";
   };
 
-  postPatch = ''
-    substituteInPlace pyproject.toml \
-      --replace "--cov-report=" "" \
-      --replace "--cov=numpydoc" ""
-  '';
+  build-system = [ setuptools ];
 
-  nativeBuildInputs = [ setuptools ];
-
-  propagatedBuildInputs = [
+  dependencies = [
     jinja2
     sphinx
     tabulate
   ];
 
   nativeCheckInputs = [
     matplotlib
+    pytest-cov-stub
     pytestCheckHook
   ];
 
   disabledTests = [
     # https://github.com/numpy/numpydoc/issues/373
     "test_MyClass"
     "test_my_function"
-    "test_reference"
+
+    # AttributeError: 'MockApp' object has no attribute '_exception_on_warning'
+    "test_mangle_docstring_validation_exclude"
+    "test_mangle_docstring_validation_warnings"
+    "test_mangle_docstrings_overrides"
   ];
 
   pythonImportsCheck = [ "numpydoc" ];