Merge branch 'main' into ci/simplify-title

Author: lwjohnst86

.cz.toml

@@ -1,5 +1,5 @@
 [tool.commitizen]
-version = "0.16.0"
+version = "0.17.5"
 bump_message = "build(version): :bookmark: update version from $current_version to $new_version"
 version_schema = "semver"
 version_provider = "commitizen"

.github/CODEOWNERS

@@ -1,13 +1,2 @@
 # All members on Developers team get added to review PRs
 * @seedcase-project/developers
-
-# Ignore these so we don't get added to sync PRs
-/.github/
-/.vscode/
-/.devcontainer/
-justfile
-.editorconfig
-.gitignore
-ruff.toml
-pyproject.toml
-uv.lock

.github/pull_request_template.md

@@ -1,13 +1,12 @@
 # Description
 
-This PR DESCRIBE CHANGES.
+These changes EXPLANATION.
 
 Closes #
 
 This PR needs a quick/an in-depth review.
 
 ## Checklist
 
-- [ ] Added or updated tests
-- [ ] Updated documentation
 - [ ] Ran `just run-all`
+- [ ] Formatted Markdown, if modified

.github/workflows/test.yml

@@ -17,7 +17,7 @@ jobs:
         uses: actions/checkout@08c6903cd8c0fde910a37f88322edcfb5dd907a8
 
       - name: Set up uv
-        uses: astral-sh/setup-uv@4959332f0f014c5280e7eac8b70c90cb574c9f9b
+        uses: astral-sh/setup-uv@557e51de59eb14aaaba2ed9621916900a91d50c6
         with:
           enable-cache: true
 

.pre-commit-config.yaml

@@ -25,6 +25,6 @@ repos:
   # sub-packages, which confuses pre-commit when it tries to find the latest
   # version
   - repo: https://github.com/adhtruong/mirrors-typos
-    rev: v1.35.5
+    rev: v1.35.6
     hooks:
       - id: typos

.vscode/json.code-snippets

@@ -1,18 +1,4 @@
 {
-  // Place your snippets for Quarto here.
-  // Each snippet is defined under a snippet name and has a prefix, body and description.
-  // The prefix is what is used to trigger the snippet and the body will be expanded and inserted.
-  // Possible variables are:
-  //
-  // - $1 and $2 for tab stops,
-  // - $0 for the final cursor position, and
-  // - ${1:label}, ${2:another} for placeholders
-  //
-  // Placeholders with the same ids are connected.
-  //
-  // How to use the code snippets:
-  // After you have set the above settings, a suggestion for one of the code snippets below will pop up automatically, when
-  // you start writing the prefix. Press "Enter" or "Tab" to insert the code snippet.
   "Insert TODO formatting": {
     "scope": "quarto,markdown",
     "prefix": "TODO",
@@ -31,21 +17,6 @@
     ],
     "description": "Insert bash formatted text"
   },
-  "Insert YAML header for blogs": {
-    "scope": "quarto,markdown",
-    "prefix": "post_yaml",
-    "body": [
-      "---",
-      "title: \"\"",
-      "description: \"Our reasons for ...\"",
-      "author: \"\"",
-      "date: last-modified",
-      "categories:",
-      "  ${0:Type 'category_keywords' to insert categories}",
-      "---"
-    ],
-    "description": "Insert YAML header for Quarto blog posts."
-  },
   "Insert a hidden comment section": {
     "scope": "quarto,markdown",
     "prefix": "hidden",
@@ -75,29 +46,5 @@
       "|   |   |   |"
     ],
     "description": "Insert a 3 col table"
-  },
-  "Insert video": {
-    "scope": "quarto,markdown",
-    "prefix": "video",
-    "body": [
-      "{{< video ${0:Insert link here} >}}"
-    ],
-    "description": "Insert video that will be shown"
-  },
-  "Insert paneltab": {
-    "scope": "quarto,markdown",
-    "prefix": "paneltab",
-    "body": [
-      "::: panel-tabset",
-      "### ${0:Header}",
-      "",
-      "${1:Text body}",
-      "",
-      "### ${2:Header}",
-      "",
-      "${3:Text body}",
-      ":::"
-    ],
-    "description": "Insert paneltab (including two tabs here). If you want additional tabs, just include more headers."
   }
 }

.vscode/settings.json

@@ -2,38 +2,34 @@
   "files.autoSave": "onFocusChange",
   "editor.wordWrap": "off",
   "editor.formatOnSave": true,
-  "editor.codeActionsOnSave": {
-    "source.organizeImports": "always"
-  },
   "git.autofetch": false,
   "quarto.visualEditor.markdownWrap": "column",
   "quarto.visualEditor.markdownWrapColumn": 72,
-  "autoDocstring.customTemplatePath": ".vscode/google-notypes.mustache",
   "editor.tabCompletion": "on",
   "editor.snippetSuggestions": "inline",
   "conventional-branch.type": [
-    "build", // Changes that affect the build system or external dependencies
-    "ci", // Changes to our CI configuration files and scripts
-    "docs", // Documentation only changes
-    "feat", // A new feature
-    "fix", // A bug fix
-    "refactor", // A code change that neither fixes a bug nor adds a feature
-    "style", // Changes that do not affect the meaning of the code (white-space, formatting, missing semi-colons, etc)
-    "test", // Adding missing tests or correcting existing tests
-    "chore", // Misc things, like renaming or deleting files
+    "build",
+    "ci",
+    "docs",
+    "feat",
+    "fix",
+    "refactor",
+    "style",
+    "test",
+    "chore",
+    "revert",
+    "perf"
   ],
   "conventional-branch.format": "{Type}/{Branch}",
-  "[quarto][qmd]": {
+  "[quarto][qmd][jinja]": {
     "editor.formatOnSave": false
   },
-  "python.defaultInterpreterPath": "${workspaceFolder}/.venv",
-  "python.languageServer": "Pylance",
-  "files.insertFinalNewline": true,
   "files.associations": {
     "justfile.jinja": "plaintext",
     "*.yml.jinja": "jinja-yaml",
     "*.cff.jinja": "jinja-yaml",
     "*.toml.jinja": "jinja-toml",
     "*.qmd.jinja": "jinja-md"
   },
+  "files.insertFinalNewline": true
 }

CHANGELOG.md

@@ -1,3 +1,87 @@
+# Changelog
+
+Since we follow [Conventional
+Commits](https://decisions.seedcase-project.org/why-conventional-commits),
+we're able to automatically create a release based on the commit message
+by using
+[Commitizen](https://decisions.seedcase-project.org/why-semantic-release-with-commitizen).
+This means that releases can happen quite often, sometimes several in
+a day. It also means any individual release will not have many changes
+within it. Below is a list of releases along with what was changed
+within it.
+
+## 0.17.5 (2025-09-02)
+
+### Refactor
+
+- :wrench: can render everything in Quarto project (#183)
+
+## 0.17.4 (2025-09-02)
+
+### Refactor
+
+- :wrench: add more items to sidebar, like overview (#182)
+
+## 0.17.3 (2025-09-02)
+
+### Refactor
+
+- :recycle: create homepage as variable, not question (#179)
+
+## 0.17.2 (2025-09-02)
+
+### Refactor
+
+- :hammer: ignore `justfile` when listing TODO items (#181)
+
+## 0.17.1 (2025-09-02)
+
+### Refactor
+
+- :recycle: need `date-released` in `CITATION.cff` (#180)
+
+## 0.17.0 (2025-09-02)
+
+### Feat
+
+- :sparkles: add CHANGELOG with some description of it (#178)
+
+## 0.16.6 (2025-09-02)
+
+### Refactor
+
+- :recycle: delete whole references folder pre and post render (#142)
+
+## 0.16.5 (2025-09-01)
+
+### Refactor
+
+- :truck: move GoatCounter file into `docs/includes/` (#177)
+
+## 0.16.4 (2025-09-01)
+
+### Refactor
+
+- :pushpin: update pre-commit versions (#171)
+
+## 0.16.3 (2025-09-01)
+
+### Refactor
+
+- :hammer: use `--upgrade` when installing Python dependencies (#174)
+
+## 0.16.2 (2025-09-01)
+
+### Refactor
+
+- :wrench: add `theme` option in `_quarto.yml`, and `brand` for Seedcase (#170)
+
+## 0.16.1 (2025-09-01)
+
+### Refactor
+
+- :technologist: simplify the pull request template (#165)
+
 ## 0.16.0 (2025-08-26)
 
 ### Feat

CITATION.cff

@@ -17,8 +17,8 @@ authors:
     given-names: Marton
     affiliation: "Steno Diabetes Center Aarhus"
 cff-version: 1.2.0
-# doi:
-# date:
+doi: 10.5281/zenodo.17018496
+date-released: 2025-09-01
 keywords:
   - "copier template"
   - "template"

CODE_OF_CONDUCT.md

@@ -0,0 +1,30 @@
+# Contributor Code of Conduct
+
+As contributors and maintainers of this project, we pledge to respect
+all people who contribute through reporting issues, posting suggestions,
+updating any material, submitting pull requests, and other activities.
+
+We are committed to making participation in this project a
+harassment-free experience for everyone, regardless of level of
+experience, gender, gender identity and expression, sexual orientation,
+disability, personal appearance, body size, race, ethnicity, age, or
+religion.
+
+Examples of unacceptable behavior by participants include the use of
+sexual language or imagery, derogatory comments or personal attacks,
+trolling, public or private harassment, insults, or other unprofessional
+conduct.
+
+Project maintainers have the right and responsibility to remove, edit,
+or reject comments, commits, code, wiki edits, issues, and other
+contributions that are not aligned to this Code of Conduct. Project
+maintainers who do not follow the Code of Conduct may be removed from
+the project team.
+
+Instances of abusive, harassing, or otherwise unacceptable behavior may
+be reported by opening an issue or contacting one or more of the project
+maintainers.
+
+This Code of Conduct is adapted from the Contributor Covenant
+(https://contributor-covenant.org), version 1.0.0, available at
+https://contributor-covenant.org/version/1/0/0/