chore: pyqual auto-fix iteration

Author: tom-sapletta-com

project/analysis.toon.yaml

@@ -5,10 +5,10 @@ HEALTH[8]:
   🔴 GOD   regix/benchmark.py = 936L, 9 classes, 31m, max CC=12
   🟡 CC    _compute_delta CC=16 (limit:15)
   🟡 CC    compare CC=16 (limit:15)
-  🟡 CC    capture CC=17 (limit:15)
   🟡 CC    diff CC=15 (limit:15)
-  🟡 CC    collect CC=19 (limit:15)
+  🟡 CC    capture CC=17 (limit:15)
   🟡 CC    filter CC=15 (limit:15)
+  🟡 CC    collect CC=19 (limit:15)
   🟡 CC    detect_smells CC=17 (limit:15)
 
 REFACTOR[3]:

project/calls.mmd

@@ -1,97 +1,97 @@
 flowchart LR
     subgraph regix__Regix
-        regix__Regix____init__["__init__"]
         regix__Regix__history["history"]
+        regix__Regix____init__["__init__"]
         regix__Regix__snapshot["snapshot"]
     end
     subgraph regix__backends
-        regix__backends__get_backend["get_backend"]
         regix__backends__structure_backend__StructureBackend__collect["collect"]
+        regix__backends__get_backend["get_backend"]
         regix__backends__structure_backend___analyse_function["_analyse_function"]
     end
     subgraph regix__benchmark
-        regix__benchmark__build_regix_suite["build_regix_suite"]
-        regix__benchmark___make_config_parse_probe["_make_config_parse_probe"]
-        regix__benchmark__BenchmarkReporter__print_json["print_json"]
-        regix__benchmark__BenchmarkReporter__print_plain["print_plain"]
-        regix__benchmark__BenchmarkReporter__print["print"]
         regix__benchmark__BackendProbe__run["run"]
-        regix__benchmark__main["main"]
-        regix__benchmark___make_gates_probe["_make_gates_probe"]
+        regix__benchmark__BenchmarkReporter__print_plain["print_plain"]
         regix__benchmark___make_snapshot_probe["_make_snapshot_probe"]
+        regix__benchmark___make_config_parse_probe["_make_config_parse_probe"]
+        regix__benchmark__BenchmarkReporter__print["print"]
         regix__benchmark___make_compare_probe["_make_compare_probe"]
+        regix__benchmark___make_gates_probe["_make_gates_probe"]
+        regix__benchmark__build_regix_suite["build_regix_suite"]
+        regix__benchmark__main["main"]
+        regix__benchmark__BenchmarkReporter__print_json["print_json"]
     end
     subgraph regix__cache
-        regix__cache___cache_dir["_cache_dir"]
+        regix__cache__store["store"]
         regix__cache__lookup["lookup"]
         regix__cache__clear["clear"]
         regix__cache___cache_key["_cache_key"]
-        regix__cache__store["store"]
+        regix__cache___cache_dir["_cache_dir"]
     end
     subgraph regix__cli
-        regix__cli__status["status"]
-        regix__cli___load_config["_load_config"]
-        regix__cli__history["history"]
-        regix__cli__gates["gates"]
         regix__cli__diff["diff"]
+        regix__cli__gates["gates"]
+        regix__cli__history["history"]
         regix__cli__snapshot["snapshot"]
+        regix__cli___load_config["_load_config"]
+        regix__cli__status["status"]
     end
     subgraph regix__compare
         regix__compare___compute_delta["_compute_delta"]
-        regix__compare___compare_symbol_metrics["_compare_symbol_metrics"]
         regix__compare__compare["compare"]
+        regix__compare___compare_symbol_metrics["_compare_symbol_metrics"]
     end
     subgraph regix__config
         regix__config__RegressionConfig__from_file["from_file"]
     end
     subgraph regix__gates
-        regix__gates__check_gates["check_gates"]
         regix__gates___passes["_passes"]
+        regix__gates__check_gates["check_gates"]
     end
     subgraph regix__git
-        regix__git__get_changed_files["get_changed_files"]
+        regix__git__read_local_sources["read_local_sources"]
+        regix__git__resolve_ref["resolve_ref"]
+        regix__git__is_clean["is_clean"]
         regix__git__list_commits["list_commits"]
         regix__git__read_tree_sources["read_tree_sources"]
-        regix__git__checkout_temporary["checkout_temporary"]
-        regix__git__get_dirty_files["get_dirty_files"]
-        regix__git__resolve_ref["resolve_ref"]
         regix__git___run_git["_run_git"]
-        regix__git__is_clean["is_clean"]
-        regix__git__read_local_sources["read_local_sources"]
+        regix__git__get_dirty_files["get_dirty_files"]
+        regix__git__checkout_temporary["checkout_temporary"]
+        regix__git__get_changed_files["get_changed_files"]
     end
     subgraph regix__history
+        regix__history___compute_trends["_compute_trends"]
         regix__history___linear_slope["_linear_slope"]
         regix__history___aggregate_snapshot_metrics["_aggregate_snapshot_metrics"]
         regix__history__build_history["build_history"]
-        regix__history___compute_trends["_compute_trends"]
     end
     subgraph regix__report
-        regix__report___render_rich["_render_rich"]
         regix__report__render["render"]
+        regix__report___render_rich["_render_rich"]
     end
     subgraph regix__smells
-        regix__smells___check_symbol_smells["_check_symbol_smells"]
-        regix__smells___largest_function["_largest_function"]
         regix__smells___avg_func_length["_avg_func_length"]
-        regix__smells___check_god_function["_check_god_function"]
-        regix__smells___check_no_delegation["_check_no_delegation"]
-        regix__smells___func_length["_func_length"]
         regix__smells___check_stub_regression["_check_stub_regression"]
-        regix__smells___count_hollow_signals["_count_hollow_signals"]
-        regix__smells___was_already_hollow["_was_already_hollow"]
-        regix__smells___function_count_drop["_function_count_drop"]
         regix__smells__detect_smells["detect_smells"]
+        regix__smells___function_count_drop["_function_count_drop"]
+        regix__smells___was_already_hollow["_was_already_hollow"]
         regix__smells___check_hallucination_proxy["_check_hallucination_proxy"]
+        regix__smells___check_god_function["_check_god_function"]
+        regix__smells___count_hollow_signals["_count_hollow_signals"]
+        regix__smells___func_length["_func_length"]
+        regix__smells___check_no_delegation["_check_no_delegation"]
+        regix__smells___largest_function["_largest_function"]
+        regix__smells___check_symbol_smells["_check_symbol_smells"]
     end
     subgraph regix__snapshot
         regix__snapshot___collect_files["_collect_files"]
-        regix__snapshot___merge_symbols["_merge_symbols"]
         regix__snapshot__capture["capture"]
         regix__snapshot___filter_sources["_filter_sources"]
+        regix__snapshot___merge_symbols["_merge_symbols"]
     end
     subgraph scripts__check_regression
-        scripts__check_regression__load_json_file["load_json_file"]
         scripts__check_regression__check_regression["check_regression"]
+        scripts__check_regression__load_json_file["load_json_file"]
     end
     scripts__check_regression__check_regression --> scripts__check_regression__load_json_file
     scripts__check_regression__check_regression --> regix__benchmark__BenchmarkReporter__print
@@ -114,13 +114,6 @@ flowchart LR
     regix__Regix____init__ --> regix__config__RegressionConfig__from_file
     regix__Regix__snapshot --> regix__snapshot__capture
     regix__Regix__history --> regix__history__build_history
-    regix__snapshot__capture --> regix__snapshot___merge_symbols
-    regix__snapshot__capture --> regix__git__resolve_ref
-    regix__snapshot__capture --> regix__backends__get_backend
-    regix__snapshot__capture --> regix__snapshot___collect_files
-    regix__snapshot__capture --> regix__git__read_local_sources
-    regix__snapshot__capture --> regix__git__read_tree_sources
-    regix__snapshot__capture --> regix__snapshot___filter_sources
     regix__cli___load_config --> regix__config__RegressionConfig__from_file
     regix__cli__history --> regix__cli___load_config
     regix__cli__snapshot --> regix__cli___load_config
@@ -131,12 +124,19 @@ flowchart LR
     regix__cli__gates --> regix__snapshot__capture
     regix__cli__gates --> regix__gates__check_gates
     regix__cli__status --> regix__cli___load_config
-    regix__report__render --> regix__report___render_rich
+    regix__snapshot__capture --> regix__snapshot___merge_symbols
+    regix__snapshot__capture --> regix__git__resolve_ref
+    regix__snapshot__capture --> regix__backends__get_backend
+    regix__snapshot__capture --> regix__snapshot___collect_files
+    regix__snapshot__capture --> regix__git__read_local_sources
+    regix__snapshot__capture --> regix__git__read_tree_sources
+    regix__snapshot__capture --> regix__snapshot___filter_sources
     regix__cache__lookup --> regix__cache___cache_dir
     regix__cache__lookup --> regix__cache___cache_key
     regix__cache__store --> regix__cache___cache_dir
     regix__cache__store --> regix__cache___cache_key
     regix__cache__clear --> regix__cache___cache_dir
+    regix__report__render --> regix__report___render_rich
     regix__smells__detect_smells --> regix__smells___check_god_function
     regix__smells__detect_smells --> regix__smells___check_symbol_smells
     regix__smells___check_symbol_smells --> regix__smells___check_hallucination_proxy

project/calls.png

@@ -26,8 +26,8 @@ flowchart TD
     regix__history -->|1| regix__snapshot
     regix__Regix -->|1| regix__snapshot
     regix__Regix -->|1| regix__history
-    regix__snapshot -->|1| regix__backends
     regix__cli -->|1| regix__history
     regix__cli -->|1| regix__gates
+    regix__snapshot -->|1| regix__backends
     regix__benchmark -->|1| regix__backends
     regix__benchmark -->|1| regix__gates

project/compact_flow.mmd

@@ -95,10 +95,10 @@
 - **Classes**: 1
 - **File**: `architecture_backend.py`
 
-### regix.backends.docstring_backend
+### regix.backends.radon_backend
 - **Functions**: 3
 - **Classes**: 1
-- **File**: `docstring_backend.py`
+- **File**: `radon_backend.py`
 
 ### regix.backends.vallm_backend
 - **Functions**: 3
@@ -172,14 +172,14 @@ Main execution flows into the system:
 > Return cached snapshot or None.
 - **Calls**: regix.cache._cache_dir, regix.cache._cache_key, path.exists, None.decode, json.loads, Snapshot, SymbolMetrics, gzip.decompress
 
-### regix.backends.docstring_backend.DocstringBackend.collect
-> Compute docstring coverage per file.
-- **Calls**: str, ast.walk, results.append, ast.parse, isinstance, SymbolMetrics, full.read_text, ast.get_docstring
-
 ### regix.backends.radon_backend.RadonBackend.collect
 > Collect MI (module-level) and CC (per-function) using radon.
 - **Calls**: str, results.append, mi_visit, cc_visit, SymbolMetrics, results.append, full.read_text, SymbolMetrics
 
+### regix.backends.docstring_backend.DocstringBackend.collect
+> Compute docstring coverage per file.
+- **Calls**: str, ast.walk, results.append, ast.parse, isinstance, SymbolMetrics, full.read_text, ast.get_docstring
+
 ### regix.benchmark.ImportProbe.run
 - **Calls**: range, min, BenchmarkResult, time.perf_counter, BenchmarkResult, subprocess.run, times.append, time.perf_counter
 
@@ -322,21 +322,21 @@ snapshot [regix.cli]
 - **Key Methods**: regix.backends.structure_backend.StructureBackend.is_available, regix.backends.structure_backend.StructureBackend.version, regix.backends.structure_backend.StructureBackend.collect, regix.backends.structure_backend.StructureBackend._collect_functions
 - **Inherits**: BackendBase
 
+### regix.models.GateResult
+> Aggregate gate evaluation result.
+- **Methods**: 3
+- **Key Methods**: regix.models.GateResult.all_passed, regix.models.GateResult.errors, regix.models.GateResult.warnings
+
 ### regix.backends.architecture_backend.ArchitectureBackend
 > Computes per-function structural metrics via AST for smell detection.
 - **Methods**: 3
 - **Key Methods**: regix.backends.architecture_backend.ArchitectureBackend.is_available, regix.backends.architecture_backend.ArchitectureBackend.version, regix.backends.architecture_backend.ArchitectureBackend.collect
 - **Inherits**: BackendBase
 
-### regix.models.GateResult
-> Aggregate gate evaluation result.
-- **Methods**: 3
-- **Key Methods**: regix.models.GateResult.all_passed, regix.models.GateResult.errors, regix.models.GateResult.warnings
-
-### regix.backends.docstring_backend.DocstringBackend
-> Measure docstring coverage using the ``ast`` module.
+### regix.backends.radon_backend.RadonBackend
+> Maintainability index and cyclomatic complexity via ``radon``.
 - **Methods**: 3
-- **Key Methods**: regix.backends.docstring_backend.DocstringBackend.is_available, regix.backends.docstring_backend.DocstringBackend.version, regix.backends.docstring_backend.DocstringBackend.collect
+- **Key Methods**: regix.backends.radon_backend.RadonBackend.is_available, regix.backends.radon_backend.RadonBackend.version, regix.backends.radon_backend.RadonBackend.collect
 - **Inherits**: BackendBase
 
 ### regix.backends.vallm_backend.VallmBackend
@@ -345,18 +345,18 @@ snapshot [regix.cli]
 - **Key Methods**: regix.backends.vallm_backend.VallmBackend.is_available, regix.backends.vallm_backend.VallmBackend.version, regix.backends.vallm_backend.VallmBackend.collect
 - **Inherits**: BackendBase
 
+### regix.backends.docstring_backend.DocstringBackend
+> Measure docstring coverage using the ``ast`` module.
+- **Methods**: 3
+- **Key Methods**: regix.backends.docstring_backend.DocstringBackend.is_available, regix.backends.docstring_backend.DocstringBackend.version, regix.backends.docstring_backend.DocstringBackend.collect
+- **Inherits**: BackendBase
+
 ### regix.backends.BackendBase
 > Interface that all analysis backends must implement.
 - **Methods**: 3
 - **Key Methods**: regix.backends.BackendBase.is_available, regix.backends.BackendBase.collect, regix.backends.BackendBase.version
 - **Inherits**: ABC
 
-### regix.backends.radon_backend.RadonBackend
-> Maintainability index and cyclomatic complexity via ``radon``.
-- **Methods**: 3
-- **Key Methods**: regix.backends.radon_backend.RadonBackend.is_available, regix.backends.radon_backend.RadonBackend.version, regix.backends.radon_backend.RadonBackend.collect
-- **Inherits**: BackendBase
-
 ### regix.backends.lizard_backend.LizardBackend
 > Cyclomatic complexity and function length via the ``lizard`` library.
 - **Methods**: 3
@@ -467,8 +467,8 @@ Functions exposed as public API (no underscore prefix):
 - `regix.cli.status` - 23 calls
 - `regix.cli.diff` - 22 calls
 - `regix.compare.compare` - 21 calls
-- `regix.snapshot.capture` - 21 calls
 - `regix.cli.gates` - 21 calls
+- `regix.snapshot.capture` - 21 calls
 - `regix.benchmark.BackendProbe.run` - 21 calls
 - `regix.cli.snapshot` - 17 calls
 - `regix.cli.history` - 16 calls
@@ -479,8 +479,8 @@ Functions exposed as public API (no underscore prefix):
 - `regix.benchmark.BenchmarkReporter.print_plain` - 14 calls
 - `regix.cache.lookup` - 13 calls
 - `regix.git.read_tree_sources` - 12 calls
-- `regix.backends.docstring_backend.DocstringBackend.collect` - 12 calls
 - `regix.backends.radon_backend.RadonBackend.collect` - 12 calls
+- `regix.backends.docstring_backend.DocstringBackend.collect` - 12 calls
 - `regix.benchmark.ImportProbe.run` - 12 calls
 - `regix.benchmark.CLIProbe.run` - 12 calls
 - `regix.benchmark.ThroughputProbe.run` - 12 calls

project/context.md

@@ -119,12 +119,12 @@ D:
     _make_gates_probe()
     benchmark_library(module;cli_commands;test_path;threshold_import;threshold_cli;threshold_tests)
     main()
-  regix/backends/vallm_backend.py:
-    e: VallmBackend
-    VallmBackend(BackendBase): is_available(0),version(0),collect(4)  # LLM-based code quality scoring via the ``vallm`` CLI tool...
   regix/backends/radon_backend.py:
     e: RadonBackend
     RadonBackend(BackendBase): is_available(0),version(0),collect(4)  # Maintainability index and cyclomatic complexity via ``radon`...
+  regix/backends/vallm_backend.py:
+    e: VallmBackend
+    VallmBackend(BackendBase): is_available(0),version(0),collect(4)  # LLM-based code quality scoring via the ``vallm`` CLI tool...
   regix/backends/structure_backend.py:
     e: _CallVisitor,StructureBackend,_analyse_function
     _CallVisitor(ast.NodeVisitor): __init__(0),visit_Call(1)  # Collect call_count and fan_out from a function body...

project/index.html

@@ -46,8 +46,8 @@ REFACTOR[12]:
   [1] H/H Split god module regix/benchmark.py (936L, 9 classes)
   [2] M/L Split _compute_delta (CC=16 → target CC<10)
   [3] M/L Split compare (CC=16 → target CC<10)
-  [4] M/L Split capture (CC=17 → target CC<10)
-  [5] M/L Split diff (CC=15 → target CC<10)
+  [4] M/L Split diff (CC=15 → target CC<10)
+  [5] M/L Split capture (CC=17 → target CC<10)
 
 EVOLUTION:
   2026-04-02 CC̄=4.6 crit=21 7910L // Automated analysis

project/map.toon.yaml

@@ -110,11 +110,11 @@ pipeline:
 
     - name: publish
       run: |
-        # Build and publish to PyPI (version already bumped)
+        # Publish to PyPI (packages built in previous steps)
         VERSION=$(cat VERSION)
         echo "Publishing version: $VERSION"
         if command -v twine &>/dev/null; then
-          python3 -m build && twine upload dist/*
+          twine upload dist/regix-${VERSION}*
         else
           echo "twine not installed — skipping publish"
         fi
@@ -134,3 +134,5 @@ pipeline:
     OPENAI_API_KEY: ${OPENROUTER_API_KEY}
     OPENAI_BASE_URL: https://openrouter.ai/api/v1
     OPENROUTER_API_KEY: ${OPENROUTER_API_KEY}
+    TWINE_USERNAME: __token__
+    TWINE_PASSWORD: ${PYPI_API_TOKEN}