Tools using SeqAn

Tools based on:

Seqan3

• Raptor - A fast and space-efficient pre-filter for querying very large collections of nucleotide sequences
• iGenVar -
• Chopper - partition your sequences
• Lambda3 - the Local Aligner for Massive Biological DatA
• Needle - A fast and space-efficient pre-filter for estimating the quantification of very large collections of nucleotide sequences
• Mars - Motif-based aligned RNA searcher
• Minions - Comparison between different methods to simplify sequence data

Seqan2

• Lambda - the Local Aligner for Massive Biological DatA
• Lara - LaRA 2: Lagrangian Relaxed structural Alignment