Weekly Todos

28.10.2019

Enrico

• Finish paper

Rene

• Final clean up PR ready
• Read up a little on story gathering

Svenja

• Get value_list validator PR merged
• Get level 2 vectorisation PR of result score_type ready
• Get bug fix for alignment IO short cigar string merged

Marcel

• Get together with hannes about the bug
• Get visibility bug PRs merged: IO, Alignment, Alphabet, Ranges.
• Trial and error with the matrix issue.

Joerg

• Get first review from Sven
• Get Level 3 PR of new configuration object ready (-> Lydia)
• Review PR about tutorials
• Brainstorming about my project

Sven

• Get the level 1 pr merged
• Review of Joergs PR level 2
• Get level 2 PR ready

Lydia

• Tutorials bis Ranges, keep track of the time to adjust the timings in a PR.
• Pair programming with Joerg level 2
• Prepare user stories.

21.10.2019

Enrico:

• Finish benchmarks on the thresholding app.
• Prepare a presentation for the JC.
• Get the visibility bug argument parser PR reviewed.

Rene

• Prepare and hold a presentation at the MPI.
• Finish a prototype for the vectorisation kernel for affine gap costs and asses further work.

Hannes:

• Debug search algorithms in lambda (SeqAn2 vs SeqAn3).

Svenja

• Get first review approval for #1298.
• Get PR for #1299 ready.
• Get IO visibility bug PR merged.

Marcel

• Take a look at Hannes' PR for 1-2 hours.
• Get visibility bug PRs merged: Core, IO, Std, Argument parser.
• Trial and error with the matrix issue.

Joerg

• Get visibility bug PR std merged.
• Create a PR for the new configurations vectorise and parallel.
• Explain the output format of LaRA in the Readme file and how to run T-Coffee.

Sven

• Review visibility bug argument parser.
• Get PR ready to review for issue #1308 (CI passes).

Lydia

• Prepare and hold lecture on Friday.
• Be done with all tutorials up to 'Parsing command line arguments with SeqAn'. (reduced)
• Pair programming with Joerg.