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Merge pull request #12 from seqeralabs/fix_other_images
fix other images
2 parents c6093b9 + b63846a commit 76ddc82

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marimo/Dockerfile

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@@ -1,7 +1,7 @@
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# ---------------------------------------------------------------
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# 1) Multi-stage build: Pull the connect-client binary
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# ---------------------------------------------------------------
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ARG CONNECT_CLIENT_VERSION
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ARG CONNECT_CLIENT_VERSION=0.8
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FROM public.cr.seqera.io/platform/connect-client:${CONNECT_CLIENT_VERSION} AS connect
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# Choose a python version that you know works with your application
@@ -26,7 +26,7 @@ EXPOSE $CONNECT_TOOL_PORT
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COPY --from=connect /usr/bin/connect-client /usr/bin/connect-client
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RUN /bin/sh -c "/usr/bin/connect-client --install"
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RUN echo "deb http://deb.debian.org/debian bookworm-backports main contrib non-free-firmware" | tee -a /etc/apt/sources.list
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RUN apt update && apt install -y btrfs-progs=6.14-1~bpo12+1
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RUN apt update && apt install -y --allow-downgrades btrfs-progs=6.14-1~bpo12+1
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ENTRYPOINT ["/usr/bin/connect-client", "--entrypoint"]
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CMD marimo edit -p $CONNECT_TOOL_PORT --no-token

streamlit/Dockerfile

Lines changed: 3 additions & 4 deletions
Original file line numberDiff line numberDiff line change
@@ -1,7 +1,7 @@
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# ---------------------------------------------------------------
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# 1) Multi-stage build: Pull the connect-client binary
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# ---------------------------------------------------------------
4-
ARG CONNECT_CLIENT_VERSION
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ARG CONNECT_CLIENT_VERSION=0.8
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FROM public.cr.seqera.io/platform/connect-client:${CONNECT_CLIENT_VERSION} AS connect
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# ---------------------------------------------------------------
@@ -17,7 +17,6 @@ WORKDIR /app
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RUN apt-get update && apt-get install -y \
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build-essential \
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curl \
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software-properties-common \
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git \
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&& rm -rf /var/lib/apt/lists/*
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@@ -42,10 +41,10 @@ ENTRYPOINT ["/usr/bin/connect-client", "--entrypoint"]
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# Add backports repository and install specific btrfs-progs version
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RUN echo "deb http://deb.debian.org/debian bookworm-backports main contrib non-free-firmware" | tee -a /etc/apt/sources.list && \
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apt-get update && \
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apt-get install -y btrfs-progs=6.14-1~bpo12+1
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apt-get install -y --allow-downgrades btrfs-progs=6.14-1~bpo12+1
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# ---------------------------------------------------------------
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# 4) Command: Run CellxGene with a dataset from a data link defined via DATASET_NAME
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# 4) Command: Run Streamlit MultiQC application
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# ---------------------------------------------------------------
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# The port is set by CONNECT_TOOL_PORT environment variable
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CMD streamlit run /app/multiqc_app.py \

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