File tree Expand file tree Collapse file tree 2 files changed +5
-6
lines changed
Expand file tree Collapse file tree 2 files changed +5
-6
lines changed Original file line number Diff line number Diff line change 11# ---------------------------------------------------------------
22# 1) Multi-stage build: Pull the connect-client binary
33# ---------------------------------------------------------------
4- ARG CONNECT_CLIENT_VERSION
4+ ARG CONNECT_CLIENT_VERSION=0.8
55FROM public.cr.seqera.io/platform/connect-client:${CONNECT_CLIENT_VERSION} AS connect
66
77# Choose a python version that you know works with your application
@@ -26,7 +26,7 @@ EXPOSE $CONNECT_TOOL_PORT
2626COPY --from=connect /usr/bin/connect-client /usr/bin/connect-client
2727RUN /bin/sh -c "/usr/bin/connect-client --install"
2828RUN echo "deb http://deb.debian.org/debian bookworm-backports main contrib non-free-firmware" | tee -a /etc/apt/sources.list
29- RUN apt update && apt install -y btrfs-progs=6.14-1~bpo12+1
29+ RUN apt update && apt install -y --allow-downgrades btrfs-progs=6.14-1~bpo12+1
3030ENTRYPOINT ["/usr/bin/connect-client" , "--entrypoint" ]
3131
3232CMD marimo edit -p $CONNECT_TOOL_PORT --no-token
Original file line number Diff line number Diff line change 11# ---------------------------------------------------------------
22# 1) Multi-stage build: Pull the connect-client binary
33# ---------------------------------------------------------------
4- ARG CONNECT_CLIENT_VERSION
4+ ARG CONNECT_CLIENT_VERSION=0.8
55FROM public.cr.seqera.io/platform/connect-client:${CONNECT_CLIENT_VERSION} AS connect
66
77# ---------------------------------------------------------------
@@ -17,7 +17,6 @@ WORKDIR /app
1717RUN apt-get update && apt-get install -y \
1818 build-essential \
1919 curl \
20- software-properties-common \
2120 git \
2221 && rm -rf /var/lib/apt/lists/*
2322
@@ -42,10 +41,10 @@ ENTRYPOINT ["/usr/bin/connect-client", "--entrypoint"]
4241# Add backports repository and install specific btrfs-progs version
4342RUN echo "deb http://deb.debian.org/debian bookworm-backports main contrib non-free-firmware" | tee -a /etc/apt/sources.list && \
4443 apt-get update && \
45- apt-get install -y btrfs-progs=6.14-1~bpo12+1
44+ apt-get install -y --allow-downgrades btrfs-progs=6.14-1~bpo12+1
4645
4746# ---------------------------------------------------------------
48- # 4) Command: Run CellxGene with a dataset from a data link defined via DATASET_NAME
47+ # 4) Command: Run Streamlit MultiQC application
4948# ---------------------------------------------------------------
5049# The port is set by CONNECT_TOOL_PORT environment variable
5150CMD streamlit run /app/multiqc_app.py \
You can’t perform that action at this time.
0 commit comments