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fix: Change boolean value remove_failed_tasks:True.
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modules/local/benchmark_report/main.nf

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Original file line numberDiff line numberDiff line change
@@ -15,7 +15,7 @@ process BENCHMARK_REPORT {
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script:
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def aws_cost_param = benchmark_aws_cur_report ? "--profile cost -P aws_cost:\$TASK_DIR/${benchmark_aws_cur_report}" : ""
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def benchmark_samplesheet = "benchmark_samplesheet.csv"
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def failed_tasks = remove_failed_tasks ? "-P remove_failed_tasks:true" : ""
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def failed_tasks = remove_failed_tasks ? "-P remove_failed_tasks:True" : ""
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"""
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# Set up R environment from renv

workflows/nf_aggregate/main.nf

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -69,7 +69,7 @@ workflow NF_AGGREGATE {
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aws_cur_report,
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params.remove_failed_tasks
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)
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ch_versions = ch_versions.mix(BENCHMARK_REPORT.out.versions.first())
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ch_versions = ch_versions.mix(BENCHMARK_REPORT.out.versions)
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}
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//

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