Skip to content

Commit 99f9f9c

Browse files
committed
Updated test samplesheet with new runs.
1 parent c86e3c1 commit 99f9f9c

File tree

3 files changed

+108
-123
lines changed

3 files changed

+108
-123
lines changed

subworkflows/local/utils_nf_aggregate/tests/main.nf.test.snap

Lines changed: 8 additions & 34 deletions
Original file line numberDiff line numberDiff line change
@@ -9,11 +9,11 @@
99
"group": [
1010

1111
],
12-
"id": "2lXd1j7OwZVfxh",
12+
"id": "5HieFbNIsw59ul",
1313
"logs": [
1414

1515
],
16-
"workspace": "community/showcase"
16+
"workspace": "seqeralabs/showcase"
1717
},
1818
{
1919
"fusion": [
@@ -22,11 +22,11 @@
2222
"group": [
2323

2424
],
25-
"id": "38QXz4OfQDpwOV",
25+
"id": "5ko1KRYm0seibn",
2626
"logs": [
2727

2828
],
29-
"workspace": "community/showcase"
29+
"workspace": "seqeralabs/showcase"
3030
},
3131
{
3232
"fusion": [
@@ -35,44 +35,18 @@
3535
"group": [
3636

3737
],
38-
"id": "3iFMo0NtH1Byvy",
38+
"id": "ULVYH4G9KM9sP",
3939
"logs": [
4040

4141
],
42-
"workspace": "community/showcase"
43-
},
44-
{
45-
"fusion": [
46-
47-
],
48-
"group": [
49-
50-
],
51-
"id": "4Bi5xBK6E2Nbhj",
52-
"logs": [
53-
54-
],
55-
"workspace": "community/showcase"
56-
},
57-
{
58-
"fusion": [
59-
60-
],
61-
"group": [
62-
63-
],
64-
"id": "4LWT4uaXDaGcDY",
65-
"logs": [
66-
67-
],
68-
"workspace": "community/showcase"
42+
"workspace": "seqeralabs/showcase"
6943
}
7044
]
7145
],
7246
"meta": {
7347
"nf-test": "0.9.2",
74-
"nextflow": "24.10.4"
48+
"nextflow": "25.04.3"
7549
},
76-
"timestamp": "2025-04-19T22:12:59.208411"
50+
"timestamp": "2025-06-11T08:37:26.139735391"
7751
}
7852
}

tests/default.nf.test.snap

Lines changed: 97 additions & 84 deletions
Original file line numberDiff line numberDiff line change
@@ -1,7 +1,7 @@
11
{
22
"-profile test": {
33
"content": [
4-
6,
4+
4,
55
{
66
"SEQERA_RUNS_DUMP": {
77
"seqera-cli": "0.11.2 (build 2a4e8d5)"
@@ -44,98 +44,111 @@
4444
"multiqc/multiqc_plots/svg/seqera_cli_process_statuses_plot-pct.svg",
4545
"multiqc/multiqc_plots/svg/seqera_cli_wall_time_plot.svg",
4646
"multiqc/multiqc_report.html",
47-
"nf-core_ampliseq",
48-
"nf-core_ampliseq/runs_dump",
49-
"nf-core_ampliseq/runs_dump/2lXd1j7OwZVfxh",
50-
"nf-core_ampliseq/runs_dump/2lXd1j7OwZVfxh/service-info.json",
51-
"nf-core_ampliseq/runs_dump/2lXd1j7OwZVfxh/workflow-launch.json",
52-
"nf-core_ampliseq/runs_dump/2lXd1j7OwZVfxh/workflow-load.json",
53-
"nf-core_ampliseq/runs_dump/2lXd1j7OwZVfxh/workflow-metadata.json",
54-
"nf-core_ampliseq/runs_dump/2lXd1j7OwZVfxh/workflow-metrics.json",
55-
"nf-core_ampliseq/runs_dump/2lXd1j7OwZVfxh/workflow-tasks.json",
56-
"nf-core_ampliseq/runs_dump/2lXd1j7OwZVfxh/workflow.json",
57-
"nf-core_rnaseq",
58-
"nf-core_rnaseq/runs_dump",
59-
"nf-core_rnaseq/runs_dump/3iFMo0NtH1Byvy",
60-
"nf-core_rnaseq/runs_dump/3iFMo0NtH1Byvy/service-info.json",
61-
"nf-core_rnaseq/runs_dump/3iFMo0NtH1Byvy/workflow-launch.json",
62-
"nf-core_rnaseq/runs_dump/3iFMo0NtH1Byvy/workflow-load.json",
63-
"nf-core_rnaseq/runs_dump/3iFMo0NtH1Byvy/workflow-metadata.json",
64-
"nf-core_rnaseq/runs_dump/3iFMo0NtH1Byvy/workflow-metrics.json",
65-
"nf-core_rnaseq/runs_dump/3iFMo0NtH1Byvy/workflow-tasks.json",
66-
"nf-core_rnaseq/runs_dump/3iFMo0NtH1Byvy/workflow.json",
67-
"nf-core_rnaseq/runs_dump/4Bi5xBK6E2Nbhj",
68-
"nf-core_rnaseq/runs_dump/4Bi5xBK6E2Nbhj/service-info.json",
69-
"nf-core_rnaseq/runs_dump/4Bi5xBK6E2Nbhj/workflow-launch.json",
70-
"nf-core_rnaseq/runs_dump/4Bi5xBK6E2Nbhj/workflow-load.json",
71-
"nf-core_rnaseq/runs_dump/4Bi5xBK6E2Nbhj/workflow-metadata.json",
72-
"nf-core_rnaseq/runs_dump/4Bi5xBK6E2Nbhj/workflow-metrics.json",
73-
"nf-core_rnaseq/runs_dump/4Bi5xBK6E2Nbhj/workflow-tasks.json",
74-
"nf-core_rnaseq/runs_dump/4Bi5xBK6E2Nbhj/workflow.json",
75-
"nf-core_rnaseq/runs_dump/4LWT4uaXDaGcDY",
76-
"nf-core_rnaseq/runs_dump/4LWT4uaXDaGcDY/service-info.json",
77-
"nf-core_rnaseq/runs_dump/4LWT4uaXDaGcDY/workflow-launch.json",
78-
"nf-core_rnaseq/runs_dump/4LWT4uaXDaGcDY/workflow-load.json",
79-
"nf-core_rnaseq/runs_dump/4LWT4uaXDaGcDY/workflow-metadata.json",
80-
"nf-core_rnaseq/runs_dump/4LWT4uaXDaGcDY/workflow-metrics.json",
81-
"nf-core_rnaseq/runs_dump/4LWT4uaXDaGcDY/workflow-tasks.json",
82-
"nf-core_rnaseq/runs_dump/4LWT4uaXDaGcDY/workflow.json",
83-
"nf-core_scrnaseq",
84-
"nf-core_scrnaseq/runs_dump",
85-
"nf-core_scrnaseq/runs_dump/38QXz4OfQDpwOV",
86-
"nf-core_scrnaseq/runs_dump/38QXz4OfQDpwOV/service-info.json",
87-
"nf-core_scrnaseq/runs_dump/38QXz4OfQDpwOV/workflow-launch.json",
88-
"nf-core_scrnaseq/runs_dump/38QXz4OfQDpwOV/workflow-load.json",
89-
"nf-core_scrnaseq/runs_dump/38QXz4OfQDpwOV/workflow-metadata.json",
90-
"nf-core_scrnaseq/runs_dump/38QXz4OfQDpwOV/workflow-metrics.json",
91-
"nf-core_scrnaseq/runs_dump/38QXz4OfQDpwOV/workflow-tasks.json",
92-
"nf-core_scrnaseq/runs_dump/38QXz4OfQDpwOV/workflow.json",
47+
"nextflow-io_hello",
48+
"nextflow-io_hello/runs_dump",
49+
"nextflow-io_hello/runs_dump/5HieFbNIsw59ul",
50+
"nextflow-io_hello/runs_dump/5HieFbNIsw59ul/nextflow.log",
51+
"nextflow-io_hello/runs_dump/5HieFbNIsw59ul/service-info.json",
52+
"nextflow-io_hello/runs_dump/5HieFbNIsw59ul/tasks",
53+
"nextflow-io_hello/runs_dump/5HieFbNIsw59ul/tasks/1",
54+
"nextflow-io_hello/runs_dump/5HieFbNIsw59ul/tasks/1/.fusion.log",
55+
"nextflow-io_hello/runs_dump/5HieFbNIsw59ul/tasks/2",
56+
"nextflow-io_hello/runs_dump/5HieFbNIsw59ul/tasks/2/.fusion.log",
57+
"nextflow-io_hello/runs_dump/5HieFbNIsw59ul/tasks/3",
58+
"nextflow-io_hello/runs_dump/5HieFbNIsw59ul/tasks/3/.fusion.log",
59+
"nextflow-io_hello/runs_dump/5HieFbNIsw59ul/tasks/4",
60+
"nextflow-io_hello/runs_dump/5HieFbNIsw59ul/tasks/4/.fusion.log",
61+
"nextflow-io_hello/runs_dump/5HieFbNIsw59ul/workflow-launch.json",
62+
"nextflow-io_hello/runs_dump/5HieFbNIsw59ul/workflow-load.json",
63+
"nextflow-io_hello/runs_dump/5HieFbNIsw59ul/workflow-metadata.json",
64+
"nextflow-io_hello/runs_dump/5HieFbNIsw59ul/workflow-metrics.json",
65+
"nextflow-io_hello/runs_dump/5HieFbNIsw59ul/workflow-tasks.json",
66+
"nextflow-io_hello/runs_dump/5HieFbNIsw59ul/workflow.json",
67+
"nextflow-io_hello/runs_dump/5ko1KRYm0seibn",
68+
"nextflow-io_hello/runs_dump/5ko1KRYm0seibn/nextflow.log",
69+
"nextflow-io_hello/runs_dump/5ko1KRYm0seibn/service-info.json",
70+
"nextflow-io_hello/runs_dump/5ko1KRYm0seibn/tasks",
71+
"nextflow-io_hello/runs_dump/5ko1KRYm0seibn/tasks/1",
72+
"nextflow-io_hello/runs_dump/5ko1KRYm0seibn/tasks/1/.fusion.log",
73+
"nextflow-io_hello/runs_dump/5ko1KRYm0seibn/tasks/2",
74+
"nextflow-io_hello/runs_dump/5ko1KRYm0seibn/tasks/2/.fusion.log",
75+
"nextflow-io_hello/runs_dump/5ko1KRYm0seibn/tasks/3",
76+
"nextflow-io_hello/runs_dump/5ko1KRYm0seibn/tasks/3/.fusion.log",
77+
"nextflow-io_hello/runs_dump/5ko1KRYm0seibn/tasks/4",
78+
"nextflow-io_hello/runs_dump/5ko1KRYm0seibn/tasks/4/.fusion.log",
79+
"nextflow-io_hello/runs_dump/5ko1KRYm0seibn/workflow-launch.json",
80+
"nextflow-io_hello/runs_dump/5ko1KRYm0seibn/workflow-load.json",
81+
"nextflow-io_hello/runs_dump/5ko1KRYm0seibn/workflow-metadata.json",
82+
"nextflow-io_hello/runs_dump/5ko1KRYm0seibn/workflow-metrics.json",
83+
"nextflow-io_hello/runs_dump/5ko1KRYm0seibn/workflow-tasks.json",
84+
"nextflow-io_hello/runs_dump/5ko1KRYm0seibn/workflow.json",
85+
"nextflow-io_hello/runs_dump/ULVYH4G9KM9sP",
86+
"nextflow-io_hello/runs_dump/ULVYH4G9KM9sP/nextflow.log",
87+
"nextflow-io_hello/runs_dump/ULVYH4G9KM9sP/service-info.json",
88+
"nextflow-io_hello/runs_dump/ULVYH4G9KM9sP/tasks",
89+
"nextflow-io_hello/runs_dump/ULVYH4G9KM9sP/tasks/1",
90+
"nextflow-io_hello/runs_dump/ULVYH4G9KM9sP/tasks/1/.fusion.log",
91+
"nextflow-io_hello/runs_dump/ULVYH4G9KM9sP/tasks/2",
92+
"nextflow-io_hello/runs_dump/ULVYH4G9KM9sP/tasks/2/.fusion.log",
93+
"nextflow-io_hello/runs_dump/ULVYH4G9KM9sP/tasks/3",
94+
"nextflow-io_hello/runs_dump/ULVYH4G9KM9sP/tasks/3/.fusion.log",
95+
"nextflow-io_hello/runs_dump/ULVYH4G9KM9sP/tasks/4",
96+
"nextflow-io_hello/runs_dump/ULVYH4G9KM9sP/tasks/4/.fusion.log",
97+
"nextflow-io_hello/runs_dump/ULVYH4G9KM9sP/workflow-launch.json",
98+
"nextflow-io_hello/runs_dump/ULVYH4G9KM9sP/workflow-load.json",
99+
"nextflow-io_hello/runs_dump/ULVYH4G9KM9sP/workflow-metadata.json",
100+
"nextflow-io_hello/runs_dump/ULVYH4G9KM9sP/workflow-metrics.json",
101+
"nextflow-io_hello/runs_dump/ULVYH4G9KM9sP/workflow-tasks.json",
102+
"nextflow-io_hello/runs_dump/ULVYH4G9KM9sP/workflow.json",
93103
"pipeline_info",
94104
"pipeline_info/collated_software_mqc_versions.yml"
95105
],
96106
[
97107
"multiqc_citations.txt:md5,4c806e63a283ec1b7e78cdae3a923d4f",
98-
"seqera_cli_cost_plot.txt:md5,5f6c0eec1ee86691a6d2914e163a5767",
99-
"seqera_cli_cpu_time_plot.txt:md5,390f4051d6092a84a2b3f73ab10643c5",
100-
"seqera_cli_process_statuses_plot.txt:md5,13414743798b07baebe846fb8d20bdde",
101-
"seqera_cli_wall_time_plot.txt:md5,abc859f5fe0dabfcded8c658de70725a",
102-
"workflow-launch.json:md5,e628f293acd704c57ed7ad7c3432a73e",
103-
"workflow-load.json:md5,947517e30d5485ad97601923f2ccb2f5",
104-
"workflow-metadata.json:md5,5c83e4ebc83982c35a9f8378ea984ce5",
105-
"workflow-metrics.json:md5,a862f20aabadbc5ab0be91642dffc00c",
106-
"workflow-tasks.json:md5,359044869a60162d6dea94eb1759422e",
107-
"workflow.json:md5,7c341a64f87ffae84b1024188184f4b2",
108-
"workflow-launch.json:md5,63103791dfe1fa048e8ae17a7bd27447",
109-
"workflow-load.json:md5,7fe53d3eb1bd3e8ab882d011a751b832",
110-
"workflow-metadata.json:md5,a536a5c829bd0a4441b647eef3fc10ec",
111-
"workflow-metrics.json:md5,15b8927b842c6fd1fc738af2e8d3462e",
112-
"workflow-tasks.json:md5,aea381edad7df39e2828ce63ba456c86",
113-
"workflow.json:md5,66bb892f5323f66b33be0dffb5a19112",
114-
"workflow-launch.json:md5,44c727a7586ffc5db92f8f94e0a56a90",
115-
"workflow-load.json:md5,4f02d5a24ab89aa648cd4346785c8f2c",
116-
"workflow-metadata.json:md5,207d9db4477cb7e205fb54b98206bf41",
117-
"workflow-metrics.json:md5,13a5b5d7447fad4a8baa053d1abf85e5",
118-
"workflow-tasks.json:md5,e327f5aae611c7f731a470bd7390d967",
119-
"workflow.json:md5,59f8a9ea713a57ea48470ff0f92cc7e5",
120-
"workflow-launch.json:md5,35fe5e90f51f101b22e4f0683bdf2184",
121-
"workflow-load.json:md5,2f5abdb8efc1fdb249378cb1af093a4a",
122-
"workflow-metadata.json:md5,25f9e1ffcf312b5683e1b6c1adb47726",
123-
"workflow-metrics.json:md5,5cb0d8e859991831eff666eed1c97b3e",
124-
"workflow-tasks.json:md5,e4b3c44af8c6c2663d767c8b009fa959",
125-
"workflow.json:md5,ade88ad661d37554229e75fc1d2b9ee4",
126-
"workflow-launch.json:md5,43ff8fd9b6217bb6eee542b354a7ebde",
127-
"workflow-load.json:md5,bebdd4917d3b769a656744ba25241898",
128-
"workflow-metadata.json:md5,afd35f96d1eb85bc5aedfd6f04b6f2a7",
129-
"workflow-metrics.json:md5,fa417298bc5c9c73c1c2bc1daf6e0406",
130-
"workflow-tasks.json:md5,10d3c1d5f0ff578c64702e9649e57c3a",
131-
"workflow.json:md5,63adb36ad806a5d6ba5ebaed7866a3d3"
108+
"seqera_cli_cost_plot.txt:md5,82f247733ca1d0d31dd78851fbdadf18",
109+
"seqera_cli_cpu_time_plot.txt:md5,97b8afc5e39838c44f027393e00162db",
110+
"seqera_cli_process_statuses_plot.txt:md5,715e9a350d22c881b7a5b7df73c52ef2",
111+
"seqera_cli_wall_time_plot.txt:md5,d00c9623dbe36e810997ffd83ef2abb5",
112+
"nextflow.log:md5,38771cfa014d7e7e9c0ca1ee0b82e46e",
113+
".fusion.log:md5,efe60f4a46ef03e9945c71959419e716",
114+
".fusion.log:md5,c4f5c5c5b6f5bf53a95ff57c898d1c12",
115+
".fusion.log:md5,e378f13b177e2bbc2586a462182112b1",
116+
".fusion.log:md5,37cadbfaf6862600a67d6134d11b2233",
117+
"workflow-launch.json:md5,3e7b34abe37c7db24c799bf3edd7307e",
118+
"workflow-load.json:md5,0a0dd7d875c5ae4a6edbf438382c6611",
119+
"workflow-metadata.json:md5,5fc3e36d7eab54b4c3068d4b21431e97",
120+
"workflow-metrics.json:md5,4cca2b6bee4da27024f0b443028d0afc",
121+
"workflow-tasks.json:md5,5c3dd661d58af62bb6b4a106538107a1",
122+
"workflow.json:md5,b0c6a4e07c25515d6e01ec7e900aacfb",
123+
"nextflow.log:md5,ac7665e4237eece9a2a6a684837e3fb7",
124+
".fusion.log:md5,12f3f602fea198ea2c09f1876ba2c188",
125+
".fusion.log:md5,a83c7b82f47f9a8cc3d1cb93bd5538cc",
126+
".fusion.log:md5,48aa42395bc6ee46209b7fb30ac23444",
127+
".fusion.log:md5,2d399e9605edbbccfc7a7e3e0103c57c",
128+
"workflow-launch.json:md5,424e200ec9b847b2fd8d7a47af88f9bd",
129+
"workflow-load.json:md5,f507be382008f25f805549f7876a5fb6",
130+
"workflow-metadata.json:md5,f11ac5f666c035f860464d66eb824fba",
131+
"workflow-metrics.json:md5,787cea6ea170686bd8263bec9b20a162",
132+
"workflow-tasks.json:md5,4167ceb0c10d07d0a2de18382804d4c7",
133+
"workflow.json:md5,60442a9b20688c6210265221b32f9ef2",
134+
"nextflow.log:md5,343952dd8a653c9e7b741b2d5718dc1f",
135+
".fusion.log:md5,748a7aa4de0725e179c4cb5c7c304b0b",
136+
".fusion.log:md5,fa1b12f2c3a3224acd1185a10ebd659f",
137+
".fusion.log:md5,037af09bb5413fbab67df727c397da9a",
138+
".fusion.log:md5,0b3003c0eb6a087b32dc04dae71095ca",
139+
"workflow-launch.json:md5,6a231be5f73342da092eb58ee2d3a470",
140+
"workflow-load.json:md5,4786bb54b42fc99165816429ba3f1731",
141+
"workflow-metadata.json:md5,45e8db6d550e11629f347dcacd0f06c4",
142+
"workflow-metrics.json:md5,6e56e50d31b1377eb878cf2655741fe5",
143+
"workflow-tasks.json:md5,e2a3a9e5d424d9ce2849338e5d765ed9",
144+
"workflow.json:md5,da3a4810ab8ad315c2082ccaa33d6fba"
132145
]
133146
],
134147
"meta": {
135148
"nf-test": "0.9.2",
136149
"nextflow": "25.04.3"
137150
},
138-
"timestamp": "2025-06-03T20:39:31.908143839"
151+
"timestamp": "2025-06-11T08:39:56.996820987"
139152
},
140153
"-profile test_benchmark": {
141154
"content": [
@@ -153,7 +166,7 @@
153166
"pipeline_info/collated_software_mqc_versions.yml"
154167
],
155168
[
156-
169+
157170
]
158171
],
159172
"meta": {
@@ -162,4 +175,4 @@
162175
},
163176
"timestamp": "2025-05-01T21:01:28.073059"
164177
}
165-
}
178+
}
Lines changed: 3 additions & 5 deletions
Original file line numberDiff line numberDiff line change
@@ -1,6 +1,4 @@
11
id,workspace
2-
4Bi5xBK6E2Nbhj,community/showcase
3-
4LWT4uaXDaGcDY,community/showcase
4-
38QXz4OfQDpwOV,community/showcase
5-
2lXd1j7OwZVfxh,community/showcase
6-
3iFMo0NtH1Byvy,community/showcase
2+
ULVYH4G9KM9sP,seqeralabs/showcase
3+
5HieFbNIsw59ul,seqeralabs/showcase
4+
5ko1KRYm0seibn,seqeralabs/showcase

0 commit comments

Comments
 (0)