Skip to content

Commit f2d5fb0

Browse files
committed
Fix peptide test samplesheet: correct target_sequence filename
The test_design_peptide profile was failing because the samplesheet referenced a non-existent file '2VSM_target_sequence.fa'. Updated to use the correct file 'nipah_virus_target_sequence_glycoproteinG.fasta' which exists in assets/test_data/. This fixes the NoSuchFileException error when running: nextflow run . -profile test_design_peptide Also verified that nanobody and protein test profiles have correct file references.
1 parent 874a9b0 commit f2d5fb0

File tree

1 file changed

+1
-1
lines changed

1 file changed

+1
-1
lines changed
Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -1,2 +1,2 @@
11
sample_id,design_yaml,structure_files,protocol,num_designs,budget,reuse,target_msa,target_sequence,target_template
2-
design1_pep,assets/test_data/nipah_peptide_design.yaml,assets/test_data/nipah_virus_Glycoprotein_competition_structure.cif,peptide-anything,3,2,,,assets/test_data/2VSM_target_sequence.fa,
2+
design1_pep,assets/test_data/nipah_peptide_design.yaml,assets/test_data/nipah_virus_Glycoprotein_competition_structure.cif,peptide-anything,3,2,,,assets/test_data/nipah_virus_target_sequence_glycoproteinG.fasta,

0 commit comments

Comments
 (0)