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lines changed Original file line number Diff line number Diff line change 1111- {ref}` sec-plink2zarr ` converts PLINK 1.0 data to
1212 [ VCF Zarr] ( https://github.com/sgkit-dev/vcf-zarr-spec/ ) format.
1313
14+ - {ref}` sec-tskit2zarr ` converts [ tskit] ( https://tskit.dev )
15+ data into [ VCF Zarr] ( https://github.com/sgkit-dev/vcf-zarr-spec/ ) format.
16+
1417- {ref}` sec-vcfpartition ` is a utility to split an input
1518 VCF into a given number of partitions. This is useful for
1619 parallel processing of VCF data.
@@ -25,13 +28,11 @@ support for other formats such as BGEN (or an interested in helping with impleme
2528please open an [ issue on Github] ( https://github.com/sgkit-dev/bio2zarr/issues )
2629to discuss!
2730
31+ ## Python APIs
2832
29- The package is currently focused on command line interfaces, but a
30- Python API is also planned.
33+ There is access to some limited functionality via Python APIs (documented
34+ along with the respective tools). These are in beta, and should be fully
35+ documented and stabilised in the coming releases. General APIs to enable
36+ efficient and straightforward encoding of data to VCZ are planned
37+ (see [ issue #412 ] ( https://github.com/sgkit-dev/bio2zarr/issues/412 ) ).
3138
32- :::{warning}
33- Although it is possible to import the bio2zarr Python package
34- the APIs are purely internal for the moment and will change
35- in arbitrary ways. Please don't use them (or open issues about
36- them on GitHub).
37- :::
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