Skip to content

Commit e73cea6

Browse files
Fixup paths in CI
Fixup tests
1 parent 1889904 commit e73cea6

File tree

2 files changed

+128
-176
lines changed

2 files changed

+128
-176
lines changed

.github/workflows/ci.yml

Lines changed: 2 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -94,11 +94,11 @@ jobs:
9494
python -m venv env-tskit
9595
source env-tskit/bin/activate
9696
python -m pip install .
97-
python -m bio2zarr tskit2zarr convert tests/data/ts/example.trees ts.vcz > ts.txt 2>&1 || echo $? > ts_exit.txt
97+
python -m bio2zarr tskit2zarr convert tests/data/tskit/example.trees ts.vcz > ts.txt 2>&1 || echo $? > ts_exit.txt
9898
test "$(cat ts_exit.txt)" = "1"
9999
grep -q "This process requires the optional tskit module. Install it with: pip install bio2zarr\[tskit\]" ts.txt
100100
python -m pip install '.[tskit]'
101-
python -m bio2zarr tskit2zarr convert tests/data/ts/example.trees ts.vcz
101+
python -m bio2zarr tskit2zarr convert tests/data/tskit/example.trees ts.vcz
102102
deactivate
103103
104104
python -m venv env-vcf

0 commit comments

Comments
 (0)