Skip to content

[WIP] User Story - Exploratory StatisticsΒ #5

@jerowe

Description

@jerowe

Before the PCA or PBS a scientist would complete several rounds of exploratory statistics and filtering.

  1. Look at distributions of the data
  2. Filter variants based on quality
  3. Subset genotypes based on previous variant statistics
  4. Filter samples (missingness)
  5. Subset genotypes based on previous sample statistics

Reference the Breaking down the PCA PR

Metadata

Metadata

Labels

No labels
No labels

Type

No type

Projects

No projects

Milestone

No milestone

Relationships

None yet

Development

No branches or pull requests

Issue actions