File tree Expand file tree Collapse file tree 2 files changed +4
-7
lines changed
validation/gwas/method/pc_relate Expand file tree Collapse file tree 2 files changed +4
-7
lines changed Original file line number Diff line number Diff line change @@ -5,13 +5,11 @@ HapMap data.
5
5
This code is scheduled as part of the Github Actions CI.
6
6
7
7
To run manually, you need to first download the test data
8
- from ` gs://sgkit-data/validation/hapmap_JPT_CHB_r23a_filtered.zip ` ,
9
- keep in mind that ` sgkit-data ` GCS bucket uses
10
- [ Requester Pays config] ( https://cloud.google.com/storage/docs/requester-pays ) ,
11
- and the file size is about 32MB.
8
+ from ` https://storage.googleapis.com/sgkit-data/validation/hapmap_JPT_CHB_r23a_filtered.zip ` ,
9
+ the file size is about 32MB.
12
10
13
11
``` bash
14
- gsutil -u $BILLING_PROJECT cp gs ://sgkit-data/validation/hapmap_JPT_CHB_r23a_filtered.zip /tmp/
12
+ wget https ://storage.googleapis.com/ sgkit-data/validation/hapmap_JPT_CHB_r23a_filtered.zip -P /tmp/
15
13
./run.sh /tmp/hapmap_JPT_CHB_r23a_filtered.zip
16
14
```
17
15
Original file line number Diff line number Diff line change @@ -10,8 +10,7 @@ TEST_DATA="$1"
10
10
11
11
if [[ -z " $TEST_DATA " ]]; then
12
12
echo " usage $0 <PATH_TO_TEST_DATA>" >&2
13
- echo " You can download real test data from gs://sgkit-data/validation/hapmap_JPT_CHB_r23a_filtered.zip" >&2
14
- echo " sgkit-data GCS bucket uses Requester Pays config: https://cloud.google.com/storage/docs/requester-pays" >&2
13
+ echo " You can download real test data from https://storage.googleapis.com/sgkit-data/validation/hapmap_JPT_CHB_r23a_filtered.zip" >&2
15
14
exit 1
16
15
fi
17
16
You can’t perform that action at this time.
0 commit comments