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Fix vcf2zarr tests
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sgkit/tests/io/test_vcf2zarr_compat.py

Lines changed: 2 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -2,7 +2,7 @@
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import pytest
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pytest.importorskip("bio2zarr")
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from bio2zarr import vcf2zarr
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from bio2zarr import icf
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from bio2zarr.constants import (
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FLOAT32_FILL,
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FLOAT32_MISSING,
@@ -23,7 +23,7 @@ def test_vcf2zarr_compat(shared_datadir, tmp_path):
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vcf_path = shared_datadir / "sample.vcf.gz"
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vcz_path = tmp_path.joinpath("sample.vcz").as_posix()
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vcf2zarr.convert(
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icf.convert(
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[vcf_path],
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vcz_path,
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variants_chunk_size=5,

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