Add multichunk validation test

Will-Tyler · jeromekelleher · commit 53742a38e1b0 · 2024-11-19T13:43:12.000Z
diff --git a/tests/test_bcftools_validation.py b/tests/test_bcftools_validation.py
@@ -34,6 +34,7 @@ def run_vcztools(args: str) -> str:
     ("args", "vcf_file"),
     [
         ("view --no-version", "sample.vcf.gz"),
+        ("view --no-version", "chr22.vcf.gz"),
         ("view --no-version -i 'INFO/DP > 10'", "sample.vcf.gz"),
         ("view --no-version -i 'FMT/DP >= 5 && FMT/GQ > 10'", "sample.vcf.gz"),
         ("view --no-version -i 'FMT/DP >= 5 & FMT/GQ>10'", "sample.vcf.gz"),

Original file line number	Diff line number	Diff line change
`@@ -34,6 +34,7 @@ def run_vcztools(args: str) -> str:`
`34`	`34`	`("args", "vcf_file"),`
`35`	`35`	`[`
`36`	`36`	`("view --no-version", "sample.vcf.gz"),`
	`37`	`+ ("view --no-version", "chr22.vcf.gz"),`
`37`	`38`	`("view --no-version -i 'INFO/DP > 10'", "sample.vcf.gz"),`
`38`	`39`	`("view --no-version -i 'FMT/DP >= 5 && FMT/GQ > 10'", "sample.vcf.gz"),`
`39`	`40`	`("view --no-version -i 'FMT/DP >= 5 & FMT/GQ>10'", "sample.vcf.gz"),`