Fix linting

Author: tomwhite

tests/test_bcftools_validation.py

@@ -192,7 +192,7 @@ def test_vcf_output_with_output_option(tmp_path, args, vcf_file):
             "sample.vcf.gz"
         ),
         (
-            r"query -f '[%CHROM %POS %SAMPLE %GT %DP %GQ\n]' -i 'FMT/DP>3 && FMT/GQ>30'",
+            r"query -f '[%CHROM %POS %SAMPLE %GT %DP %GQ\n]' -i 'FMT/DP>3 && FMT/GQ>30'",  # noqa: E501
             "sample.vcf.gz"
         ),
     ],

tests/test_query.py

@@ -136,13 +136,14 @@ def test(self, root, query_format, expected_result):
         result = "".join(generator(chunk_data))
         assert result == expected_result
 
+    # fmt: off
     @pytest.mark.parametrize(
         ("query_format", "call_mask", "expected_result"),
         [
             (
                 r"[%DP ]\n",
                 None,
-                ". . . \n. . . \n1 8 5 \n3 5 3 \n6 0 4 \n. 4 2 \n4 2 3 \n. . . \n. . . \n",
+                ". . . \n. . . \n1 8 5 \n3 5 3 \n6 0 4 \n. 4 2 \n4 2 3 \n. . . \n. . . \n",  # noqa: E501
             ),
             (
                 r"[%DP ]\n",
@@ -159,10 +160,11 @@ def test(self, root, query_format, expected_result):
                         [1, 1, 1,],
                     ]
                 ),
-                ". . . \n. . . \n1 5 \n3 5 3 \n6 0 4 \n. 4 2 \n4 2 3 \n. . . \n. . . \n",
+                ". . . \n. . . \n1 5 \n3 5 3 \n6 0 4 \n. 4 2 \n4 2 3 \n. . . \n. . . \n",  # noqa: E501
             ),
         ],
     )
+    # fmt: on
     def test_call_mask(self, root, query_format, call_mask, expected_result):
         generator = QueryFormatGenerator(root, query_format)
         chunk_data = next(variant_chunk_iter(root))