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1 parent 3d4e9a1 commit 81e9589Copy full SHA for 81e9589
vcztools/vcf_writer.py
@@ -393,9 +393,7 @@ def _generate_header(
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)
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# [1.4.7 Contig field format]
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- contig_lengths = (
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- ds.attrs["contig_lengths"] if "contig_lengths" in ds.attrs else None
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- )
+ contig_lengths = ds["contig_length"] if "contig_length" in ds else None
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for i, contig in enumerate(contigs):
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if contig_lengths is None:
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print(f"##contig=<ID={contig}>", file=output)
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