PDSclassifier/DESCRIPTION at main · sidmall/PDSclassifier · GitHub

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Package: PDSclassifier
Title: Pathway-Derived Subtypes of Colorectal Cancer
Version: 1.0.1
Authors@R:
    c(person(given = "Sudhir",
             family = "Malla",
             role = c("aut", "cre"),
             email = "s.malla@qub.ac.uk",
             comment = c(ORCID = "0000-0001-5862-3815")),
      person(given = "Philip",
             family = "Dunne",
             role = "aut",
             email = "p.dunne@qub.ac.uk",
             comment = c(ORCID = "0000-0001-9160-283X")))
Description: An pathway-based classifier of colorectal cancer
    that utilises pathway-level scores to stratify transcriptomic data
    into molecularly and biologically distinct subtypes, called Pathway-Derived Subtype (PDS).
    It can be applied to both human and mice.
License: GPL (>= 3)
URL: https://dunne-lab.com/, https://github.com/sidmall/PDSclassifier
BugReports: https://github.com/sidmall/PDSclassifier/issues
Encoding: UTF-8
LazyData: true
LazyDataCompression: xz
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.1
Imports:
    BiocParallel,
    caret (>= 6.0.93),
    dplyr (>= 0.8.3),
    escape (>= 1.6.0),
    GSVA (>= 1.26.0),
    kernlab (>= 0.9.31),
    Matrix (>= 1.5.3),
    scales (>= 1.2.1),
    Seurat,
    SingleCellExperiment (>= 1.18.1),
    sva (>= 3.26.0)
Depends:
    R (>= 2.10)
Suggests:
    beepr