Skip to content

Commit 2d4287c

Browse files
Add changes
1 parent 337c407 commit 2d4287c

File tree

20 files changed

+25378
-23553
lines changed

20 files changed

+25378
-23553
lines changed

_data/containers.yaml

Lines changed: 42 additions & 26 deletions
Original file line numberDiff line numberDiff line change
@@ -9,13 +9,13 @@ bases:
99
name: python
1010
- count: 301
1111
name: centos
12-
- count: 287
12+
- count: 288
1313
name: alpine
1414
- count: 258
1515
name: ghcr.io/mkandes/naked-singularity
1616
- count: 253
1717
name: aibasel/downward
18-
- count: 236
18+
- count: 237
1919
name: continuumio/miniconda3
2020
- count: 134
2121
name: tensorflow/tensorflow
@@ -30,9 +30,9 @@ bases:
3030
- count: 77
3131
name: neurodebian
3232
- count: 56
33-
name: conda/miniconda3
34-
- count: 55
3533
name: fedora
34+
- count: 56
35+
name: conda/miniconda3
3636
- count: 52
3737
name: continuumio/miniconda
3838
- count: 51
@@ -73,12 +73,12 @@ bases:
7373
name: osrf/ros
7474
- count: 25
7575
name: nipy/heudiconv
76-
- count: 25
77-
name: continuumio/anaconda3
7876
- count: 24
79-
name: rockylinux
80-
- count: 23
8177
name: pennlinc/xcp_d
78+
- count: 24
79+
name: rockylinux
80+
- count: 24
81+
name: continuumio/anaconda3
8282
- count: 22
8383
name: khanlab/tar2bids
8484
- count: 21
@@ -101,6 +101,8 @@ bases:
101101
name: bioconductor/bioconductor_docker
102102
- count: 16
103103
name: rocker/verse
104+
- count: 15
105+
name: nipreps/nibabies
104106
- count: 15
105107
name: khanlab/neuroglia-dwi
106108
- count: 15
@@ -111,8 +113,6 @@ bases:
111113
name: jtchilders/singularity_image_recipes
112114
- count: 14
113115
name: khanlab/hippunfold
114-
- count: 14
115-
name: nipreps/nibabies
116116
- count: 14
117117
name: ebothmann/sherpa-singularity
118118
- count: 14
@@ -789,6 +789,10 @@ bases:
789789
name: maplesond/portcullis
790790
- count: 2
791791
name: vnmd/freesurfer_8.0.0
792+
- count: 2
793+
name: biocontainers/blast
794+
- count: 2
795+
name: biocontainers/bcftools
792796
- count: 2
793797
name: scleveland/centos7-base-singularity
794798
- count: 2
@@ -969,6 +973,8 @@ bases:
969973
name: ../../R/r-minimal/r-minimal_3.5.1.simg
970974
- count: 2
971975
name: ../../R/r/r_3.5.1.simg
976+
- count: 2
977+
name: registry.scicore.unibas.ch/schwede/openstructure
972978
- count: 2
973979
name: ecpe4s/ubuntu20.04-oneapi-x86_64
974980
- count: 2
@@ -1027,10 +1033,6 @@ bases:
10271033
name: sorcerer01/opensees
10281034
- count: 1
10291035
name: biocontainers/samtools
1030-
- count: 1
1031-
name: biocontainers/bcftools
1032-
- count: 1
1033-
name: biocontainers/blast
10341036
- count: 1
10351037
name: alantrrs/py-faster-rcnn
10361038
- count: 1
@@ -1469,6 +1471,8 @@ bases:
14691471
name: centos7.sif
14701472
- count: 1
14711473
name: cyberbotics/webots
1474+
- count: 1
1475+
name: continuumio/miniconda3@sha256
14721476
- count: 1
14731477
name: spark.img
14741478
- count: 1
@@ -1707,6 +1711,8 @@ bases:
17071711
name: singularity_libs_mpich
17081712
- count: 1
17091713
name: rootproject/root
1714+
- count: 1
1715+
name: biocontainers/{{tool_name}}
17101716
- count: 1
17111717
name: jupyter/scipy-notebook
17121718
- count: 1
@@ -2149,8 +2155,6 @@ bases:
21492155
name: patroonorg/patroonrs
21502156
- count: 1
21512157
name: r-minimal/r-minimal_3.5.1.simg
2152-
- count: 1
2153-
name: registry.scicore.unibas.ch/schwede/openstructure
21542158
- count: 1
21552159
name: electronioncollider/jleic
21562160
- count: 1
@@ -2204,19 +2208,19 @@ bases:
22042208
- count: 1
22052209
name: tin6150/r4eta
22062210
bootstraps:
2207-
- count: 7344
2211+
- count: 7353
22082212
name: docker
22092213
- count: 511
22102214
name: shub
2211-
- count: 431
2215+
- count: 433
22122216
name: debootstrap
22132217
- count: 386
22142218
name: library
22152219
- count: 344
22162220
name: oras
22172221
- count: 214
22182222
name: localimage
2219-
- count: 178
2223+
- count: 182
22202224
name: yum
22212225
- count: 35
22222226
name: zypper
@@ -2273,14 +2277,14 @@ orgs:
22732277
name: twongjirad
22742278
- count: 8
22752279
name: vanessa
2280+
- count: 8
2281+
name: biocontainers
2282+
- count: 8
2283+
name: continuumio
22762284
- count: 8
22772285
name: nvidia
22782286
- count: 7
22792287
name: nvcr.io/hpc
2280-
- count: 7
2281-
name: biocontainers
2282-
- count: 7
2283-
name: continuumio
22842288
- count: 6
22852289
name: nipreps
22862290
- count: 6
@@ -3249,7 +3253,7 @@ orgs:
32493253
name: tin6150
32503254
tags:
32513255
latest: 778
3252-
other: 6899
3256+
other: 6908
32533257
versions:
32543258
/nrs/funke/singularity/linajea/pylp_base:
32553259
v1.5.img: 1
@@ -3362,6 +3366,7 @@ versions:
33623366
'3.19': 1
33633367
'3.20': 9
33643368
3.20.0: 1
3369+
'3.22': 1
33653370
'3.4': 2
33663371
'3.5': 1
33673372
'3.6': 4
@@ -3635,6 +3640,10 @@ versions:
36353640
RELEASE_3_11: 1
36363641
biocontainers/bamtools:
36373642
latest: 1
3643+
biocontainers/bcftools:
3644+
1.19--h8b25389_0: 1
3645+
biocontainers/blast:
3646+
2.15.0: 1
36383647
biocontainers/bowtie2:
36393648
v2.4.1_cv1: 1
36403649
biocontainers/fastqc:
@@ -3643,6 +3652,8 @@ versions:
36433652
v0.11.9_cv8: 1
36443653
biocontainers/t-coffee:
36453654
v12.00.7fb08c2-4-deb_cv1: 1
3655+
biocontainers/{{tool_name}}:
3656+
'{{tool_version}}': 1
36463657
biocorecrg/debian-perlbrew:
36473658
buster: 1
36483659
biocorecrg/debian-perlbrew-pyenv3-java:
@@ -3835,6 +3846,8 @@ versions:
38353846
4.8.2: 11
38363847
4.9.2: 2
38373848
latest: 33
3849+
continuumio/miniconda3@sha256:
3850+
3a2017213a16daff5bc8dec8571354249c3370d6b0d64ac78e8538257ce42d4c: 1
38383851
cornellcac/presto:
38393852
latest: 1
38403853
cornellcac/pulsar-pipeline:
@@ -4075,7 +4088,7 @@ versions:
40754088
'34': 5
40764089
'35': 3
40774090
'36': 2
4078-
'40': 4
4091+
'40': 5
40794092
latest: 3
40804093
fempar/fempar-env:
40814094
gnu-debug_p4est-parallel: 1
@@ -4882,6 +4895,7 @@ versions:
48824895
25.0.1: 1
48834896
25.0.2: 1
48844897
25.1.0: 1
4898+
25.1.1: 1
48854899
nipreps/nirodents:
48864900
0.2.1: 1
48874901
nipreps/smriprep:
@@ -5023,7 +5037,7 @@ versions:
50235037
22.04-py3: 3
50245038
22.05-py3: 1
50255039
22.08-py3: 1
5026-
23.09-py3: 1
5040+
25.06-py3: 1
50275041
nvcr.io/nvidia/rapidsai/rapidsai-core:
50285042
22.08-cuda11.0-runtime-ubuntu20.04-py3.9: 1
50295043
nvcr.io/nvidia/riva/riva-speech:
@@ -5352,6 +5366,7 @@ versions:
53525366
0.10.5: 1
53535367
0.10.6: 1
53545368
0.10.7: 1
5369+
0.11.0: 1
53555370
0.6.0: 1
53565371
0.6.1: 1
53575372
0.6.2: 1
@@ -5805,6 +5820,7 @@ versions:
58055820
'20.04': 1
58065821
registry.scicore.unibas.ch/schwede/openstructure:
58075822
2.0.0: 1
5823+
2.11.0: 1
58085824
repronim/reproin:
58095825
0.11.3: 1
58105826
0.11.6: 1

0 commit comments

Comments
 (0)