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marcodelapierremarcodelapierre
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fixing version updates for some quay.io/biocontainers (#500)
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+30
-21
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12 files changed

+30
-21
lines changed

‎registry/quay.io/biocontainers/bamtools/container.yaml‎

Lines changed: 3 additions & 2 deletions
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@@ -3,9 +3,10 @@ url: https://quay.io/repository/biocontainers/bamtools
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maintainer: '@marcodelapierre'
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description: C++ API and command-line toolkit for working with BAM data.
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latest:
6-
2.5.1--he860b03_4: sha256:40bc7f10591d9ed34c75a789e286fec80cd1e5d642b10274d09b09f494e14831
6+
2.5.1--hd03093a_10: sha256:a5b2a2e6c9d080f478adb5fa5406b6a2a808489d999911c1a9752a227ccd8c6b
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tags:
8-
2.5.1--h9a82719_9: sha256:1df72d906a4db1f47d71516a8f026eecd614271f9c4c8e5e8ccde9210fcde227
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2.5.1--he860b03_4: sha256:40bc7f10591d9ed34c75a789e286fec80cd1e5d642b10274d09b09f494e14831
9+
2.5.1--h9a82719_9: sha256:1df72d906a4db1f47d71516a8f026eecd614271f9c4c8e5e8ccde9210fcde227
10+
2.5.1--hd03093a_10: sha256:a5b2a2e6c9d080f478adb5fa5406b6a2a808489d999911c1a9752a227ccd8c6b
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aliases:
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bamtools: /usr/local/bin/bamtools

‎registry/quay.io/biocontainers/bedtools/container.yaml‎

Lines changed: 3 additions & 2 deletions
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@@ -3,9 +3,10 @@ url: https://quay.io/repository/biocontainers/bedtools
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maintainer: '@marcodelapierre'
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description: Bedtools is the swiss army knife for genome arithmetic.
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latest:
6-
2.30.0--hc088bd4_0: sha256:b0018bd0a10853e19ee92f6d46d8d12f1c41e516845105e1f02c91b4d7b961b1
6+
2.30.0--h468198e_3: sha256:7824178c95ca5aefdd0f19a9092f8a2434ee51d830517eeb840e5b08efb4d7f1
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tags:
8-
2.30.0--h7d7f7ad_1: sha256:a2e163619a608525ff784ee296c6925bb75fdc243573fe07edad8c91ee1ad83d
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2.30.0--hc088bd4_0: sha256:b0018bd0a10853e19ee92f6d46d8d12f1c41e516845105e1f02c91b4d7b961b1
9+
2.30.0--h7d7f7ad_1: sha256:a2e163619a608525ff784ee296c6925bb75fdc243573fe07edad8c91ee1ad83d
10+
2.30.0--h468198e_3: sha256:7824178c95ca5aefdd0f19a9092f8a2434ee51d830517eeb840e5b08efb4d7f1
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aliases:
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bedtools: /usr/local/bin/bedtools

‎registry/quay.io/biocontainers/bracken/container.yaml‎

Lines changed: 2 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -4,10 +4,10 @@ maintainer: '@marcodelapierre'
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description: A highly accurate statistical method that computes the abundance of species
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in DNA sequences from a metagenomics sample.
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latest:
7-
2.6.1--py27h2bce143_0: sha256:8f186d27ce8f6e31fd6697aa1a761492e9df7cd7153908cf38046e27dac24ed8
7+
2.6.1--py39hc16433a_3: sha256:f4d3098b9480e0b0e7ea57bfe0a67db7b68bd7276d942c2fb2ab54c53fc8e3b1
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tags:
9-
2.6.1--py27h2bce143_0: sha256:8f186d27ce8f6e31fd6697aa1a761492e9df7cd7153908cf38046e27dac24ed8
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2.6.1--py39h7cff6ad_2: sha256:7150ebf3b4efbbf3584fcdb1e4bb66bab7a030b1e8676e221757915d2278f66f
10+
2.6.1--py39hc16433a_3: sha256:f4d3098b9480e0b0e7ea57bfe0a67db7b68bd7276d942c2fb2ab54c53fc8e3b1
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aliases:
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bracken: /usr/local/bin/bracken
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bracken-build: /usr/local/bin/bracken-build

‎registry/quay.io/biocontainers/bwa-mem2/container.yaml‎

Lines changed: 2 additions & 2 deletions
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@@ -3,9 +3,9 @@ url: https://quay.io/repository/biocontainers/bwa-mem2
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maintainer: '@marcodelapierre'
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description: Bwa-mem2 is the next version of the bwa-mem algorithm in BWA.
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latest:
6-
2.2.1--he513fc3_0: sha256:8489086047b16f49a01a077065c88258c28027c49c35281f77df353bcc370970
6+
2.2.1--hd03093a_2: sha256:df046077d0771d622d2889039050a995a71430ed155f0f94f52e944bf2785b2a
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tags:
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2.2.1--h9a82719_1: sha256:df29c78f3e199b8f1639f6fc53c47c039e23fb33d107ce53c6645e6bcc3a6415
9-
2.2.1--he513fc3_0: sha256:8489086047b16f49a01a077065c88258c28027c49c35281f77df353bcc370970
9+
2.2.1--hd03093a_2: sha256:df046077d0771d622d2889039050a995a71430ed155f0f94f52e944bf2785b2a
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aliases:
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bwa-mem2: /usr/local/bin/bwa-mem2

‎registry/quay.io/biocontainers/bwa/container.yaml‎

Lines changed: 3 additions & 2 deletions
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@@ -4,9 +4,10 @@ maintainer: '@marcodelapierre'
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description: BWA is a program for aligning sequencing reads against a large reference
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genome.
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latest:
7-
0.7.17--h84994c4_4: sha256:4f183ae370c240d175cd55424538b39f047c8add50896de896f0d12a73d4a9a0
7+
0.7.17--h7132678_9: sha256:07822e4293a8c59755b295c448b9541db6c9bdbfdedb010bdbdcc1e1e935370f
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tags:
9-
0.7.17--h5bf99c6_8: sha256:f8494324de6da332792dc8e4acc2549152375e1966c96163087d6ff6d42ff48c
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0.7.17--h84994c4_4: sha256:4f183ae370c240d175cd55424538b39f047c8add50896de896f0d12a73d4a9a0
10+
0.7.17--h5bf99c6_8: sha256:f8494324de6da332792dc8e4acc2549152375e1966c96163087d6ff6d42ff48c
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0.7.17--h7132678_9: sha256:07822e4293a8c59755b295c448b9541db6c9bdbfdedb010bdbdcc1e1e935370f
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aliases:
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bwa: /usr/local/bin/bwa

‎registry/quay.io/biocontainers/clustalo/container.yaml‎

Lines changed: 2 additions & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -3,9 +3,10 @@ url: https://quay.io/repository/biocontainers/clustalo
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maintainer: '@sarahbeecroft'
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description: Multiple sequence alignment program for aligning 3+ sequences together
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latest:
6-
1.2.4--1: sha256:ca8cccff20860fee28aec2ca408657d9ef03009991c438a23ab41b45d6f9bcf9
6+
1.2.4--h87f3376_5: sha256:7e636b5b9836aa37d704a4d5e593843ca77221741c333b5a225357c93d75b6a0
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tags:
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1.2.4--1: sha256:ca8cccff20860fee28aec2ca408657d9ef03009991c438a23ab41b45d6f9bcf9
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1.2.4--he1b5a44_3: sha256:6703d1623f640ddf7212d7541eea083e2327988c28b7952efc8f6cbe5bf785d1
10+
1.2.4--h87f3376_5: sha256:7e636b5b9836aa37d704a4d5e593843ca77221741c333b5a225357c93d75b6a0
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aliases:
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clustalo: /usr/local/bin/clustalo

‎registry/quay.io/biocontainers/kraken2/container.yaml‎

Lines changed: 3 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -3,10 +3,11 @@ url: https://quay.io/repository/biocontainers/kraken2
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maintainer: '@marcodelapierre'
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description: 'A taxonomic classification system using exact k-mer matches to achieve high accuracy and fast classification speeds.'
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latest:
6-
2.1.2--pl5262h7d875b9_0: sha256:3ce3592fb5d85d96ca1f9872bb407f1d939cf7e8758e47c4df841f075f094557
6+
2.1.2--pl5321h9f5acd7_2: sha256:2208f6895251786e2a673789a3242d62873ac9e10d0edb40213e97ef7c92e980
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tags:
8-
2.1.2--pl5262h7d875b9_0: sha256:3ce3592fb5d85d96ca1f9872bb407f1d939cf7e8758e47c4df841f075f094557
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2.1.1--pl5262h7d875b9_1: sha256:f61773d6ed01cbe6b0dee06c61bd23ec108fa8a33cc5ffbed4b863ccaa566b61
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2.1.2--pl5262h7d875b9_0: sha256:3ce3592fb5d85d96ca1f9872bb407f1d939cf7e8758e47c4df841f075f094557
10+
2.1.2--pl5321h9f5acd7_2: sha256:2208f6895251786e2a673789a3242d62873ac9e10d0edb40213e97ef7c92e980
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aliases:
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kraken2: /usr/local/bin/kraken2
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kraken2-build: /usr/local/bin/kraken2-build

‎registry/quay.io/biocontainers/mrbayes/container.yaml‎

Lines changed: 3 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -4,10 +4,11 @@ maintainer: '@sarahbeecroft'
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description: A program for Bayesian inference and model choice across a wide range
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of phylogenetic and evolutionary models
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latest:
7-
3.2.7a--hcee41ef_0: sha256:bf64e9bd6a35d0b7e132a7766b89a8787ee1fb4cb269cc97f62fd3ab78b2e422
7+
3.2.7--h5465cc4_4: sha256:c07cbbd563dec595ac4bf4aaedd87ce4c0fcc548ff92bc48a8a7d5cd151ec0a1
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tags:
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3.2.6--0: sha256:a81b94e4659014c25c5840b01f1f5ba5b635d2ce061134e2911f55f974c49b3f
10-
3.2.7--h19cf415_2: sha256:893140dd1c0019013652f77f379641cadf1c43d7d96b9cef35cf8d1475f25991
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3.2.7a--hcee41ef_0: sha256:bf64e9bd6a35d0b7e132a7766b89a8787ee1fb4cb269cc97f62fd3ab78b2e422
11+
3.2.7--h19cf415_2: sha256:893140dd1c0019013652f77f379641cadf1c43d7d96b9cef35cf8d1475f25991
12+
3.2.7--h5465cc4_4: sha256:c07cbbd563dec595ac4bf4aaedd87ce4c0fcc548ff92bc48a8a7d5cd151ec0a1
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aliases:
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mb: /usr/local/bin/mb

‎registry/quay.io/biocontainers/mummer/container.yaml‎

Lines changed: 2 additions & 1 deletion
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@@ -4,9 +4,10 @@ maintainer: '@sarahbeecroft'
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description: MUMmer is a system for rapidly aligning entire genomes in complete or
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in draft form.
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latest:
7-
3.23--pl526_7: sha256:21462ca45429aaeebb0a298d5ae830aa7c299771166c762bea2b5bde20db43f8
7+
3.23--pl5321h1b792b2_13: sha256:913c4cccaa59758830527f30e476d46d02253e98c5f4e481112d1f581696475f
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tags:
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3.23--pl526_7: sha256:21462ca45429aaeebb0a298d5ae830aa7c299771166c762bea2b5bde20db43f8
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3.23--pl526he1b5a44_11: sha256:2a0b6a706b92f2507d033bef6d3e4fe6bca2104f44e870447b414cfa34e67c38
11+
3.23--pl5321h1b792b2_13: sha256:913c4cccaa59758830527f30e476d46d02253e98c5f4e481112d1f581696475f
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aliases:
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mummer: /usr/local/bin/mummer

‎registry/quay.io/biocontainers/trimmomatic/container.yaml‎

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -3,7 +3,7 @@ url: https://quay.io/repository/biocontainers/trimmomatic
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maintainer: '@audreystott'
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description: A flexible read trimming tool for Illumina NGS data.
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latest:
6-
0.39--0: sha256:8301349be3aef6d65d803dbb8a58ec4e4e2323867e94182a6684ebd4b28661bb
6+
0.39--hdfd78af_2: sha256:b52e7e3159fda36b7b5c119a9a1e673e6a63e480eff8617b689c031f76998870
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tags:
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0.39--0: sha256:8301349be3aef6d65d803dbb8a58ec4e4e2323867e94182a6684ebd4b28661bb
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0.39--hdfd78af_2: sha256:b52e7e3159fda36b7b5c119a9a1e673e6a63e480eff8617b689c031f76998870

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