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> CONGA was developed to detect correlation between T cell gene expression profile and TCR sequence in single-cell datasets.
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Schattgen, S. A. et al. [Linking T cell receptor sequence to transcriptional profiles with clonotype neighbor graph analysis (CoNGA).](https://www.biorxiv.org/content/10.1101/2020.06.04.134536v1) Cold Spring Harbor Laboratory 2020.06.04.134536 (2020) doi:10.1101/2020.06.04.134536
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Schattgen, S. A. et al. [Linking T cell receptor sequence to transcriptional profiles with clonotype neighbor graph analysis (CoNGA).](https://doi.org/10.1101/2020.06.04.134536) Cold Spring Harbor Laboratory 2020.06.04.134536 (2020) doi:10.1101/2020.06.04.134536
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### ClusTCR: a Python interface for rapid clustering of large sets of CDR3 sequences with unknown antigen specificity

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