Merge pull request #217 from smithlabcode/abismal-submodule-update

andrewdavidsmith · web-flow · commit 5a1f5a696cbc · 2024-06-02T11:30:32.000-07:00
abismal submodule update
diff --git a/data/md5sum.txt b/data/md5sum.txt
@@ -16,7 +16,7 @@ bcbf01be810cbf4051292813eb6b9225  tests/tRex1.idx
 ec6a686617cad31e9f7a37a3d378e6ed  tests/two_epialleles.states
 93e38b20d162062a5d147c4290095a13  tests/mlml.out
 d947fe3d61ef7b1564558a69608f0e64  tests/methylome.pmd
-7d481d31e4316e97d519838f4887b10d  tests/reads.sam
-466e2715f0c677593e84b3790efbec6e  tests/reads.fmt.sam
-5583ebe1b689159f8eb0a93f32e2fd48  tests/reads.fmt.srt.uniq.sam
 d41d8cd98f00b204e9800998ecf8427e  tests/two_epialleles.amr
+7fff91916ffd22d4a934b74acf0c01a2  tests/reads.fmt.sam
+f963e689859dcf38a26acda9a65a6431  tests/reads.sam
+091eee8aa30193dafe9116120f72cec8  tests/reads.fmt.srt.uniq.sam
diff --git a/docs/content/environment.yaml b/docs/content/environment.yaml
@@ -1,3 +1,3 @@
 name: docs
 dependencies:
-  - jinja2<3.1.0
+  - Jinja2>3.1.4
diff --git a/docs/requirements.txt b/docs/requirements.txt
@@ -1,8 +1,7 @@
-jinja2==3.0.3
+Jinja2>=3.1.4
 mkdocs>=1.3.1
 babel>=2.9.0
 click>=7.0
-Jinja2>=2.10.2
 Markdown>=3.2.1,<3.4
 PyYAML>=5.2
 watchdog>=2.0.0
diff --git a/src/abismal b/src/abismal
@@ -1 +1 @@
-Subproject commit 0bc1b192853a285cf471be905f37194ab40fc157
+Subproject commit 2c9187306f467de48403ef6202b69a8a0f132855
