Makefile.am: adding test script for diff in radmeth

Author: andrewdavidsmith

Makefile.am

@@ -80,7 +80,8 @@ EXTRA_DIST = \
              test_scripts/test_radmeth.test \
              test_scripts/test_states.test \
              test_scripts/test_amrfinder.test \
-             test_scripts/test_hypermr.test
+             test_scripts/test_hypermr.test \
+             test_scripts/test_diff.test
 
 ### ADS: the file md5sum.txt can be regenerated by running the tests
 ### with "make check" and then doing `md5sum tests/* > md5sum.txt`
@@ -109,7 +110,8 @@ TESTS = test_scripts/test_simreads.test \
         test_scripts/test_radmeth.test \
         test_scripts/test_states.test \
         test_scripts/test_amrfinder.test \
-        test_scripts/test_hypermr.test
+        test_scripts/test_hypermr.test \
+        test_scripts/test_diff.test
 
 TEST_EXTENSIONS = .test
 
@@ -234,4 +236,5 @@ CLEANFILES = \
     tests/radmeth_test_output.txt \
     tests/reads.epiread \
     tests/two_epialleles.amr \
-    tests/araTha1_simulated.hypermr
+    tests/araTha1_simulated.hypermr \
+    tests/methylomes.diff

test_scripts/test_uniq.test

@@ -11,6 +11,6 @@ if [[ -e "${infile}" ]]; then
         exit 1;
     fi
 else
-    echo "${infile} not found; skipping remaining tests";
+    echo "${infile} not found; skipping dependent tests";
     exit 77;
 fi