diff --git a/docs/further.md b/docs/further.md index 181b403..c82185c 100644 --- a/docs/further.md +++ b/docs/further.md @@ -254,6 +254,12 @@ If you do not deliberately set the snakemake resource `slurm_account`, the plugi By contrast, some clusters _do not_ allow users to set their account or partition; for example, because they have a pre-defined default per user. In such cases, where the plugin's default behavior would interfere with your setup or requirements, you can use the `--slurm-no-account` flag to turn it off. +##### Passing Commands as Scripts: `--slurm-pass-command-as-script` + +When this flag is enabled, the command that Snakemake would normally pass directly to `sbatch` via the `--wrap` option is instead written into a small temporary shell script which is submitted with `sbatch