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CHANGELOG.md

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# Version 1.2.1
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- Fixed custom modifications and custom models not being displayed
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- Fixed print output including unnecessary parts
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- Updated naming of "folder" button to better reflect it use for Bruker .d data
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- Better error output + merged identical errors
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- Added generalised display of flanking residues for identified peptidoforms
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- Improved support for MaxNovo _de novo_ sequences
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- Added support for π-HelixNovo, π-PrimeNovo, Proteoscape, and Casanovo v5.0
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# Version 1.2.0 - Neutral losses & bug hunting
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- Fixed manual not opening & updated manual

Cargo.lock

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backend/Cargo.toml

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[package]
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name = "annotator"
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version = "1.2.0"
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version = "1.2.1"
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description = "A simple tool to help you manually discover the depths of your (complex) spectra, one spectrum at a time. Load your rawfiles, select a spectrum and add your annotation with full control over theoretical fragments. Use the interactive spectrum to discover what your spectrum means and to export gorgeous images."
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authors = ["Douwe Schulte <d.schulte@uu.nl>"]
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license = "MIT OR Apache-2.0"

documentation/identified_peptidoform_files.typ

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[Fasta],
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[No header requirements],
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[mzTab],
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[v1.0 & Casanovo],
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[v1.0 & Casanovo (3.x, 4.x, & 5.0)],
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[SSL],
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[Spectrum sequence list]
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)
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[DeepNovoFamily],
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[DeepNovo, PointNovo, BiatNovo, PGPointNovo],
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[InstaNovo],
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[1.0.0],
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[1.0.0 & 1.1.4],
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[MaxQuant],
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[msms, msms scans, novo msms scans, & silac],
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[MSFragger],
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[4.2 Fragpipe: 20, 21, & 22, & Philosopher],
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[4.2 & 4.3 Fragpipe: 20, 21, & 22, & Philosopher],
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[NovoB],
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[0.0.1],
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[Novor],
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[X, X+, 11, 12, 13 Dia de novo, Ab, DB peptidoforms, DB PSM, & DB protein-peptidoform],
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[PepNet],
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[1.0],
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[PowerNovo],
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[1.0.1],
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[π-HelixNovo],
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[1.1],
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[π-PrimeNovo],
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[0.1],
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[pLink],
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[2.3],
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[PLGS],
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[3.0],
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[PowerNovo],
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[1.0.17],
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[Proteoscape],
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[2025B],
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[Sage],
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[0.14],
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)
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