changelog update and some tidying up

Author: kwinkunks

CHANGELOG.md

@@ -1,8 +1,32 @@
 # CHANGELOG
 
-## 0.1.7, September 2022
+## 0.1.6, 11 September 2022
 
-- Added `xarray.DataArray` accessor (in `xarray.py`) to save in ZMAP and OpendTect formats. The plan is to add more formats according to need.
+The overall plan of `gio` is starting to take shape. In general, the plan is to read specialist subsurace formats of various file types, with either `xarray.Dataset` or `xarray.DataArray` as the target. Then, `gio` will write these same formats via an accessor method on the `xarray` object (and possibly also via ordinary functions). This release implements this pattern for the first time, specifically for the ZMAP format.
 
+- Added the `zmap` module, with functions for reading ZMAP files (`read_zmap()`) and for writing files starting from an `xarray.DataArray` or from a NumPy array.
+- Added `xarray.DataArray` accessor (in `xarray.py`) to save in ZMAP and OpendTect formats. The plan is to add more target formats the the accessor, according to need.
+- Added tests for the ZMAP components. Removed `run_tests.py` and put the `pytest` options in `setup.cfg`, which seems cleaner.
+- Started trying to maintain this file properly!
+- Note that there are two 'work in progress' modules: `esri.py` and `usgs.py`, which will eventually read some common DEM formats.
 
-## Early releases, January to June 2022
+In general, everything is a work in progress but if there is a chapter on something in [the User Guide](https://code.agilescientific.com/gio/index.html#user-guide) then it mostly works, at least for the test cases I have. If you have a file that should work but doesn't, please consider [making an issue](https://github.com/agilescientific/gio/issues).
+
+Feedback is welcome on whether the target format for readers should be `xarray.Dataset` every time, even for singleton files.
+
+
+## 0.1.5, 12 February 2022
+
+- Added the `random` module, which generates random surfaces using sums of Perlin noise. The high-level interface is `gio.generate_random_surface()`. Also added a notebook for help on this module.
+- Added the `logo` module, which plots gio's logo. Using the logo in the docs.
+
+
+## 0.1.4, 3 February 2022
+
+- New module: `surfer`, adapted from Seequent's [`steno3d_surfer`](https://pypi.org/project/steno3d_surfer), for reading Surfer 6 binary and ASCII files, and Surfer 7 binary files. The module does not write files yet.
+- Started development on `iesx` module for reading IESX formatted files, eg from Petrel or OpendTect
+
+
+## 0.1.0 to 0.1.3, February 2022
+
+- Early development included setting up the package, and adding the `opendtect` and `xy_to_grid` modules.

gio/dem.py gio/esri.pygio/dem.py renamed to gio/esri.py

@@ -1,7 +1,9 @@
 """
-Read 2D ASCII/binary Surfer grid files.
+Read E00 format DEM (digital elevation model) files.
 
-:copyright: 2022 Agile Geoscience (this adaptation)
+THIS IS A WORK IN PROGRESS.  IT DOES NOT WORK YET.
+
+:copyright: 2022 Agile Geoscience
 :license: Apache 2.0
 """
 import numpy as np
@@ -30,4 +32,13 @@ def read_e00_text(fname):
     p = re.compile(r"IFO(.+?)EOI", flags=re.DOTALL)
     ifo, = p.search(text).groups()
 
+    # Unflatten this thing.
+    values = []
+    for row in data:
+        for col in row:
+            values.append(float(col))
+
+    # Convert to an array and reshape.
+    arr = np.array(values).reshape(ny, nx)
+
     return arr

gio/xy_to_grid.py

@@ -1,4 +1,3 @@
-# -*- coding: utf-8 -*-
 """
 Special case: binning data with only (x, y) coords.