Merge branch 'develop' into openblas-dynamic-dispatch-aarch64

Author: wdconinc

.ci/gitlab/.gitlab-ci.yml

@@ -239,7 +239,7 @@ dotenv:
   - export WRITE_DOTENV_SCRIPT_REF="0f92f8bcd4dd94fc7379eef8db5c9ed6f1935402"
   - export WRITE_DOTENV_SCRIPT_SHA256="124d80ef595b9ddc2fca3f202a70ee15378547ad5e887fe7d3b248669c5ee54a"
   - curl -LSsO https://raw.githubusercontent.com/spack/spack-packages/$WRITE_DOTENV_SCRIPT_REF/.ci/gitlab/scripts/common/write_dotenv.py
-  - echo "$WRITE_DOTENV_SCRIPT_SHA256 write_dotenv.py" | sha256sum --check --status
+  - echo "$WRITE_DOTENV_SCRIPT_SHA256  write_dotenv.py" | sha256sum -c
   - python3 write_dotenv.py .ci/env
   - cat env
 

.ci/gitlab/configs/ci.yaml

@@ -59,7 +59,7 @@ ci:
 
   - signing-job:
       image:
-        name: ghcr.io/spack/notary@sha256:8b685186de3e26bfacbdfea27cf3802c853e2f1311e833e4d857247791a636dc
+        name: ghcr.io/spack/notary@sha256:a1e2575e12a1d60083a65f0a1b35abf0df85d7086e7f8b10c2a9926614a46127
         entrypoint: [""]
       tags: ["aws"]
       script:
@@ -150,7 +150,7 @@ ci:
         - nproc || true
       # Clone the other repo
       - - curl -LSsO https://raw.githubusercontent.com/spack/spack-packages/$REMOTE_SCRIPT_REF/.ci/gitlab/scripts/common/clone_spack.sh
-        - echo "$REMOTE_SCRIPT_CLONE_SPACK_SHA256 clone_spack.sh" | sha256sum --check --status
+        - echo "$REMOTE_SCRIPT_CLONE_SPACK_SHA256  clone_spack.sh" | sha256sum -c
         - sh clone_spack.sh
       - - . "${SPACK_CI_SPACK_ROOT}/share/spack/setup-env.sh"
         - spack --version

.ci/gitlab/configs/linux/x86_64_v4/ci.yaml

@@ -3,8 +3,4 @@ ci:
   - build-job:
       variables:
         SPACK_CI_TARGET: x86_64_v4
-      before_script:
-      - - curl -LfsS "https://github.com/JuliaBinaryWrappers/GNUMake_jll.jl/releases/download/GNUMake-v4.3.0+1/GNUMake.v4.3.0.x86_64-linux-gnu.tar.gz" -o gmake.tar.gz
-        - printf "fef1f59e56d2d11e6d700ba22d3444b6e583c663d6883fd0a4f63ab8bd280f0f gmake.tar.gz" | sha256sum --check --strict --quiet
-        - tar -xzf gmake.tar.gz -C /usr bin/make 2> /dev/null
       tags: ["x86_64_v4"]

repos/spack_repo/builtin/packages/adiak/package.py

@@ -2,6 +2,8 @@
 #
 # SPDX-License-Identifier: (Apache-2.0 OR MIT)
 
+import os
+
 from spack_repo.builtin.build_systems.cmake import CMakePackage
 
 from spack.package import *
@@ -19,12 +21,15 @@ class Adiak(CMakePackage):
 
     variant("mpi", default=True, description="Build with MPI support")
     variant("shared", default=True, description="Build dynamic libraries")
+    variant("python", default=False, when="@0.5.0:", description="Build Python bindings")
 
     license("MIT")
 
+    version("master", branch="master")
     version(
-        "0.4.1", commit="7ac997111785bee6d9391664b1d18ebc2b3c557b", submodules=True, preferred=True
+        "0.5.0", commit="f08c8375c613e13e9b9c6a1db271cbf8f0d3f3e3", submodules=True, preferred=True
     )
+    version("0.4.1", commit="7ac997111785bee6d9391664b1d18ebc2b3c557b", submodules=True)
     version("0.4.0", commit="7e8b7233f8a148b402128ed46b2f0c643e3b397e", submodules=True)
     version("0.2.2", commit="3aedd494c81c01df1183af28bc09bade2fabfcd3", submodules=True)
     version("0.2.1", commit="950e3bfb91519ecb7b7ee7fa3063bfab23c0e2c9", submodules=True)
@@ -36,6 +41,11 @@ class Adiak(CMakePackage):
 
     depends_on("mpi", when="+mpi")
 
+    with when("+python"):
+        extends("python")
+        depends_on("python@3:", type=("build", "link", "run"))
+        depends_on("[email protected]:", type=("build", "link", "run"))
+
     def cmake_args(self):
         args = []
         if self.spec.satisfies("+mpi"):
@@ -50,5 +60,12 @@ def cmake_args(self):
         else:
             args.append("-DBUILD_SHARED_LIBS=OFF")
 
+        if self.spec.satisfies("+python"):
+            args.append("-DENABLE_PYTHON_BINDINGS=ON")
+            pybind11_cmake = os.path.join(
+                self.spec["py-pybind11"].prefix, "pybind11", "share", "cmake", "pybind11"
+            )
+            args.append(f"-Dpybind11_DIR={pybind11_cmake}")
+
         args.append("-DENABLE_TESTS=OFF")
         return args

repos/spack_repo/builtin/packages/amdsmi/package.py

@@ -23,6 +23,7 @@ class Amdsmi(CMakePackage):
     libraries = ["libamd_smi"]
 
     license("MIT")
+    version("7.1.1", sha256="2a9dfafac9593d3093c3f5fc611682e712f08816414f210344ea7b719c085ff5")
     version("7.1.0", sha256="17ccddf8988a5674edb360b9f3b41bf3d94c6f4ba36cf8d84739c6ccdfc87c50")
     version("7.0.2", sha256="6df8d828157124b513f4ffa6c059231398b19120f5b782ec42fc151862e2cf90")
     version("7.0.0", sha256="5a126721473859afc687bd5f00bf480cffc76c2aed2bfa0b74dfbc87d93037a2")

repos/spack_repo/builtin/packages/amrex/package.py

@@ -29,6 +29,7 @@ class Amrex(CMakePackage, CudaPackage, ROCmPackage):
     license("BSD-3-Clause")
 
     version("develop", branch="development")
+    version("26.01", sha256="b26c8d36b3941881bb5db683147f94d5a48f9bcedfa4bcf65a36acb6f0710bcb")
     version("25.12", sha256="60a788cf398563cdf25438a3bbe597fe1f3b18f359b30fb3c0f568dd62908f1a")
     version("25.11", sha256="be9e5f04e1f3e2252a14e5bb817fb4f2c231e0901ef85ee4e14341616f6b1ba6")
     version("25.10", sha256="3c3e9e239b42a5c73e72a418bd29cf6bb7660646ee62f5e11ff131eaaa04fa16")
@@ -194,7 +195,7 @@ class Amrex(CMakePackage, CudaPackage, ROCmPackage):
         depends_on("conduit")
         depends_on("conduit +mpi", when="+mpi")
     with when("+catalyst"):
-        depends_on("[email protected]: +conduit")
+        depends_on("[email protected]:")
         depends_on("libcatalyst +mpi", when="+mpi")
     with when("+sundials"):
         depends_on("[email protected]: +ARKODE +CVODE", when="@21.07:22.04")

repos/spack_repo/builtin/packages/arkouda/makefile-fpic-2025.12.16.patch

@@ -0,0 +1,23 @@
+diff --git a/make/Prologue.mk b/make/Prologue.mk
+index 13a9c4be1..099896ec9 100644
+--- a/make/Prologue.mk
++++ b/make/Prologue.mk
+@@ -236,15 +236,15 @@ compile-arrow-cpp:
+
+ .PHONY: compile-arrow-write
+ compile-arrow-write:
+-	$(CHPL_CXX) -O3 -std=c++17 -c $(ARROW_WRITE_CPP) -o $(ARROW_WRITE_O) $(INCLUDE_FLAGS) $(ARROW_SANITIZE)
++	$(CHPL_CXX) -O3 -std=c++17 -fPIC -c $(ARROW_WRITE_CPP) -o $(ARROW_WRITE_O) $(INCLUDE_FLAGS) $(ARROW_SANITIZE)
+
+ .PHONY: compile-arrow-read
+ compile-arrow-read:
+-	$(CHPL_CXX) -O3 -std=c++17 -c $(ARROW_READ_CPP) -o $(ARROW_READ_O) $(INCLUDE_FLAGS) $(ARROW_SANITIZE)
++	$(CHPL_CXX) -O3 -std=c++17 -fPIC -c $(ARROW_READ_CPP) -o $(ARROW_READ_O) $(INCLUDE_FLAGS) $(ARROW_SANITIZE)
+
+ .PHONY: compile-arrow-util
+ compile-arrow-util:
+-	$(CHPL_CXX) -O3 -std=c++17 -c $(ARROW_UTIL_CPP) -o $(ARROW_UTIL_O) $(INCLUDE_FLAGS) $(ARROW_SANITIZE)
++	$(CHPL_CXX) -O3 -std=c++17 -fPIC -c $(ARROW_UTIL_CPP) -o $(ARROW_UTIL_O) $(INCLUDE_FLAGS) $(ARROW_SANITIZE)
+
+ $(ARROW_UTIL_O): $(ARROW_UTIL_CPP) $(ARROW_UTIL_H)
+ 	make compile-arrow-util

repos/spack_repo/builtin/packages/arkouda/package.py

@@ -27,6 +27,9 @@ class Arkouda(MakefilePackage):
 
     version("main", branch="main")
 
+    version(
+        "2025.12.16", sha256="72638e9d8aa1889b6bafa76c6e8060e0c8aab0871be2693f8fb10f57cd4acbfa"
+    )
     version(
         "2025.09.30", sha256="10f488a3ff3482b66f1b1e8a4235d72e91ad07acb932eca85d1e695f0f6155a2"
     )
@@ -75,6 +78,11 @@ class Arkouda(MakefilePackage):
     depends_on("hdf5+hl~mpi", type=("build", "link", "run", "test"))
     depends_on("libiconv", type=("build", "link", "run", "test"))
     depends_on("libidn2", type=("build", "link", "run", "test"))
+    depends_on(
+        "arrow+brotli+bz2+lz4+parquet+snappy+zlib+zstd",
+        type=("build", "link", "run"),
+        when="@2025.12.16:",
+    )
     depends_on(
         "arrow@:19+brotli+bz2+lz4+parquet+snappy+zlib+zstd",
         type=("build", "link", "run"),
@@ -101,7 +109,8 @@ class Arkouda(MakefilePackage):
 
     # Some systems need explicit -fPIC flag when building the Arrow functions
     patch("makefile-fpic-2024.06.21.patch", when="@2024.06.21")
-    patch("makefile-fpic-2024.10.02.patch", when="@2024.10.02:")
+    patch("makefile-fpic-2024.10.02.patch", when="@2024.10.02:2025.09.30")
+    patch("makefile-fpic-2025.12.16.patch", when="@2025.12.16")
 
     sanity_check_is_file = [join_path("bin", "arkouda_server")]
 

repos/spack_repo/builtin/packages/asio/package.py

@@ -59,7 +59,7 @@ class Asio(AutotoolsPackage):
         msg="asio v1.22.1 fixed missing includes necessary for gcc v12 and above",
     )
 
-    stds = ("11", "14", "17", "20")
+    stds = ("11", "14", "17", "20", "23")
     variant(
         "cxxstd",
         default="11",

repos/spack_repo/builtin/packages/aws_ofi_nccl/package.py

@@ -19,6 +19,7 @@ class AwsOfiNccl(AutotoolsPackage):
     maintainers("bvanessen", "msimberg")
 
     version("master", branch="master")
+    version("1.17.2", sha256="6676f49cdfbaa10e953f18aad55f25812e0a7e716692bc911a69fd55cab42181")
     version("1.17.1", sha256="15a3b5db51075d20b2cb255b99668a7161779fdf5455436e3bea02d59a04685a")
     version("1.17.0", sha256="45a383ffca1e17866e290247e4a314d190aeee09c5380b983a62633168765ec1")
     version("1.16.3", sha256="a3e99ecdb6331139b28097ffb3dc03418ed41d1867c6d225778e16a22fbebf60")