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remove redundant args
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pipeline/run_antismash.sh

Lines changed: 3 additions & 2 deletions
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@@ -49,5 +49,6 @@ module unload python/3
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source activate antismash
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CPU=$SLURM_CPUS_ON_NODE
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antismash --taxon fungi --outputfolder $OUT --clusterblast --subclusterblast --smcogs --knownclusterblast --borderpredict --asf -c $CPUS \
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--asf --full-hmmer --cassis --clusterblast --smcogs --subclusterblast --knownclusterblast $INFILE
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antismash --taxon fungi -c $CPUS --outputfolder $OUT --clusterblast --subclusterblast --smcogs --knownclusterblast \
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--borderpredict --asf \
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--full-hmmer --cassis --clusterblast --smcogs --subclusterblast --knownclusterblast $INFILE

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