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release/v1.3.0: updating version numbers
1 parent 010bc6b commit cf5d6de

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‎cmdstanpy/_version.py‎

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@@ -1,3 +1,3 @@
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"""PyPi Version"""
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__version__ = '1.2.5'
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__version__ = '1.3.0'

‎docs/_modules/cmdstanpy/cmdstan_args.html‎

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‎docs/_modules/cmdstanpy/compilation.html‎

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‎docs/_modules/cmdstanpy/install_cmdstan.html‎

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@@ -5,7 +5,7 @@
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<head>
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<meta charset="utf-8" />
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<meta name="viewport" content="width=device-width, initial-scale=1.0" />
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<title>cmdstanpy.install_cmdstan &#8212; CmdStanPy 1.2.5 documentation</title>
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<title>cmdstanpy.install_cmdstan &#8212; CmdStanPy 1.3.0 documentation</title>
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<link href="../../_static/styles/theme.css?digest=1999514e3f237ded88cf" rel="stylesheet">
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<link href="../../_static/styles/pydata-sphinx-theme.css?digest=1999514e3f237ded88cf" rel="stylesheet">
@@ -61,7 +61,7 @@
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<div id="navbar-start">
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<!-- This will display the version of the docs -->
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<a class='navbar-brand' href='../../index.html'>CmdStanPy 1.2.5</a>
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<a class='navbar-brand' href='../../index.html'>CmdStanPy 1.3.0</a>
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</div>
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@@ -191,6 +191,7 @@ <h1>Source code for cmdstanpy.install_cmdstan</h1><div class="highlight"><pre>
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<span class="sd"> --cores: int, number of cores to use when building, defaults to 1</span>
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<span class="sd"> -c, --compiler : flag, add C++ compiler to path (Windows only)</span>
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<span class="sd">&quot;&quot;&quot;</span>
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194195
<span class="kn">import</span> <span class="nn">argparse</span>
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<span class="kn">import</span> <span class="nn">json</span>
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<span class="kn">import</span> <span class="nn">os</span>
@@ -204,7 +205,7 @@ <h1>Source code for cmdstanpy.install_cmdstan</h1><div class="highlight"><pre>
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<span class="kn">from</span> <span class="nn">collections</span> <span class="kn">import</span> <span class="n">OrderedDict</span>
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<span class="kn">from</span> <span class="nn">pathlib</span> <span class="kn">import</span> <span class="n">Path</span>
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<span class="kn">from</span> <span class="nn">time</span> <span class="kn">import</span> <span class="n">sleep</span>
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<span class="kn">from</span> <span class="nn">typing</span> <span class="kn">import</span> <span class="n">TYPE_CHECKING</span><span class="p">,</span> <span class="n">Any</span><span class="p">,</span> <span class="n">Callable</span><span class="p">,</span> <span class="n">Dict</span><span class="p">,</span> <span class="n">Optional</span><span class="p">,</span> <span class="n">Union</span>
208+
<span class="kn">from</span> <span class="nn">typing</span> <span class="kn">import</span> <span class="n">TYPE_CHECKING</span><span class="p">,</span> <span class="n">Any</span><span class="p">,</span> <span class="n">Callable</span><span class="p">,</span> <span class="n">Optional</span><span class="p">,</span> <span class="n">Union</span>
208209

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<span class="kn">from</span> <span class="nn">tqdm.auto</span> <span class="kn">import</span> <span class="n">tqdm</span>
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@@ -259,7 +260,7 @@ <h1>Source code for cmdstanpy.install_cmdstan</h1><div class="highlight"><pre>
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<span class="n">EXTENSION</span> <span class="o">=</span> <span class="s1">&#39;.exe&#39;</span> <span class="k">if</span> <span class="n">is_windows</span><span class="p">()</span> <span class="k">else</span> <span class="s1">&#39;&#39;</span>
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<span class="k">def</span> <span class="nf">get_headers</span><span class="p">()</span> <span class="o">-&gt;</span> <span class="n">Dict</span><span class="p">[</span><span class="nb">str</span><span class="p">,</span> <span class="nb">str</span><span class="p">]:</span>
263+
<span class="k">def</span> <span class="nf">get_headers</span><span class="p">()</span> <span class="o">-&gt;</span> <span class="nb">dict</span><span class="p">[</span><span class="nb">str</span><span class="p">,</span> <span class="nb">str</span><span class="p">]:</span>
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<span class="w"> </span><span class="sd">&quot;&quot;&quot;Create headers dictionary.&quot;&quot;&quot;</span>
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<span class="n">headers</span> <span class="o">=</span> <span class="p">{}</span>
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<span class="n">GITHUB_PAT</span> <span class="o">=</span> <span class="n">os</span><span class="o">.</span><span class="n">environ</span><span class="o">.</span><span class="n">get</span><span class="p">(</span><span class="s2">&quot;GITHUB_PAT&quot;</span><span class="p">)</span> <span class="c1"># pylint:disable=invalid-name</span>
@@ -461,13 +462,13 @@ <h1>Source code for cmdstanpy.install_cmdstan</h1><div class="highlight"><pre>
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<span class="k">raise</span> <span class="n">CmdStanInstallError</span><span class="p">(</span><span class="sa">f</span><span class="s1">&#39;Command &quot;make build&quot; failed</span><span class="se">\n</span><span class="si">{</span><span class="nb">str</span><span class="p">(</span><span class="n">e</span><span class="p">)</span><span class="si">}</span><span class="s1">&#39;</span><span class="p">)</span>
462463
<span class="k">if</span> <span class="ow">not</span> <span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">exists</span><span class="p">(</span><span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="s1">&#39;bin&#39;</span><span class="p">,</span> <span class="s1">&#39;stansummary&#39;</span> <span class="o">+</span> <span class="n">EXTENSION</span><span class="p">)):</span>
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<span class="k">raise</span> <span class="n">CmdStanInstallError</span><span class="p">(</span>
464-
<span class="sa">f</span><span class="s1">&#39;bin/stansummary</span><span class="si">{</span><span class="n">EXTENSION</span><span class="si">}</span><span class="s1"> not found&#39;</span>
465-
<span class="s1">&#39;, please rebuild or report a bug!&#39;</span>
465+
<span class="sa">f</span><span class="s1">&#39;bin/stansummary</span><span class="si">{</span><span class="n">EXTENSION</span><span class="si">}</span><span class="s1"> not found, please rebuild or &#39;</span>
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<span class="s1">&#39;report a bug!&#39;</span>
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<span class="p">)</span>
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<span class="k">if</span> <span class="ow">not</span> <span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">exists</span><span class="p">(</span><span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="s1">&#39;bin&#39;</span><span class="p">,</span> <span class="s1">&#39;diagnose&#39;</span> <span class="o">+</span> <span class="n">EXTENSION</span><span class="p">)):</span>
468469
<span class="k">raise</span> <span class="n">CmdStanInstallError</span><span class="p">(</span>
469-
<span class="sa">f</span><span class="s1">&#39;bin/stansummary</span><span class="si">{</span><span class="n">EXTENSION</span><span class="si">}</span><span class="s1"> not found&#39;</span>
470-
<span class="s1">&#39;, please rebuild or report a bug!&#39;</span>
470+
<span class="sa">f</span><span class="s1">&#39;bin/stansummary</span><span class="si">{</span><span class="n">EXTENSION</span><span class="si">}</span><span class="s1"> not found, please rebuild or &#39;</span>
471+
<span class="s1">&#39;report a bug!&#39;</span>
471472
<span class="p">)</span>
472473

473474
<span class="k">if</span> <span class="n">is_windows</span><span class="p">():</span>
@@ -591,8 +592,8 @@ <h1>Source code for cmdstanpy.install_cmdstan</h1><div class="highlight"><pre>
591592
<span class="p">)</span>
592593
<span class="k">if</span> <span class="n">overwrite</span> <span class="ow">and</span> <span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">exists</span><span class="p">(</span><span class="s1">&#39;.&#39;</span><span class="p">):</span>
593594
<span class="nb">print</span><span class="p">(</span>
594-
<span class="s1">&#39;Overwrite requested, remove existing build of version &#39;</span>
595-
<span class="s1">&#39;</span><span class="si">{}</span><span class="s1">&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">cmdstan_version</span><span class="p">)</span>
595+
<span class="s1">&#39;Overwrite requested, remove existing build &#39;</span>
596+
<span class="s1">&#39;of version </span><span class="si">{}</span><span class="s1">&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">cmdstan_version</span><span class="p">)</span>
596597
<span class="p">)</span>
597598
<span class="n">clean_all</span><span class="p">(</span><span class="n">verbose</span><span class="p">)</span>
598599
<span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Rebuilding version </span><span class="si">{}</span><span class="s1">&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">cmdstan_version</span><span class="p">))</span>
@@ -670,10 +671,8 @@ <h1>Source code for cmdstanpy.install_cmdstan</h1><div class="highlight"><pre>
670671
<span class="k">break</span>
671672
<span class="k">except</span> <span class="n">urllib</span><span class="o">.</span><span class="n">error</span><span class="o">.</span><span class="n">HTTPError</span> <span class="k">as</span> <span class="n">e</span><span class="p">:</span>
672673
<span class="k">raise</span> <span class="n">CmdStanRetrieveError</span><span class="p">(</span>
673-
<span class="s1">&#39;HTTPError: </span><span class="si">{}</span><span class="se">\n</span><span class="s1">&#39;</span>
674-
<span class="s1">&#39;Version </span><span class="si">{}</span><span class="s1"> not available from github.com.&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span>
675-
<span class="n">e</span><span class="o">.</span><span class="n">code</span><span class="p">,</span> <span class="n">version</span>
676-
<span class="p">)</span>
674+
<span class="s1">&#39;HTTPError: </span><span class="si">{}</span><span class="se">\n</span><span class="s1">Version </span><span class="si">{}</span><span class="s1"> not available from &#39;</span>
675+
<span class="s1">&#39;github.com.&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">e</span><span class="o">.</span><span class="n">code</span><span class="p">,</span> <span class="n">version</span><span class="p">)</span>
677676
<span class="p">)</span> <span class="kn">from</span> <span class="nn">e</span>
678677
<span class="k">except</span> <span class="n">urllib</span><span class="o">.</span><span class="n">error</span><span class="o">.</span><span class="n">URLError</span> <span class="k">as</span> <span class="n">e</span><span class="p">:</span>
679678
<span class="nb">print</span><span class="p">(</span>
@@ -819,7 +818,7 @@ <h1>Source code for cmdstanpy.install_cmdstan</h1><div class="highlight"><pre>
819818
<span class="n">compile_example</span><span class="p">(</span><span class="n">args</span><span class="o">.</span><span class="n">verbose</span><span class="p">)</span>
820819

821820

822-
<span class="k">def</span> <span class="nf">parse_cmdline_args</span><span class="p">()</span> <span class="o">-&gt;</span> <span class="n">Dict</span><span class="p">[</span><span class="nb">str</span><span class="p">,</span> <span class="n">Any</span><span class="p">]:</span>
821+
<span class="k">def</span> <span class="nf">parse_cmdline_args</span><span class="p">()</span> <span class="o">-&gt;</span> <span class="nb">dict</span><span class="p">[</span><span class="nb">str</span><span class="p">,</span> <span class="n">Any</span><span class="p">]:</span>
823822
<span class="n">parser</span> <span class="o">=</span> <span class="n">argparse</span><span class="o">.</span><span class="n">ArgumentParser</span><span class="p">(</span><span class="s2">&quot;install_cmdstan&quot;</span><span class="p">)</span>
824823
<span class="n">parser</span><span class="o">.</span><span class="n">add_argument</span><span class="p">(</span>
825824
<span class="s1">&#39;--interactive&#39;</span><span class="p">,</span>

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