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README.md

Home / Modules / Elastin

Elastin

Elastic fiber network in the dermis representing tropoelastin production and MMP-mediated degradation.

Biology

Elastic fibers provide the dermis with recoil and resilience, allowing skin to return to its original shape after deformation. The elastic fiber network consists of an elastin core surrounded by fibrillin microfibrils. Elastin has an extraordinarily long half-life of approximately 70 years, making it one of the most stable proteins in the human body. New elastic fiber production by fibroblasts (via tropoelastin secretion) is extremely slow, which is why wounds and scars permanently lose their elasticity.

Elastin is degraded by elastase and MMP-9 (produced by M1 macrophages). In the context of wound healing, elastic fibers within the wound cylinder are disrupted and recover very slowly compared to collagen, contributing to the mechanical differences between scar tissue and normal skin.

This module is a groundwork module (disabled by default) that adds the elastin PDE field without affecting wound healing dynamics.

Model

Elastin PDE: no diffusion (structural ECM, immobile), very slow decay 0.0002 (natural turnover, half-life ~70 years).

Initialization: sub-layer profile based on z-coordinate. Reticular dermis has the highest density (basal_density = 0.5), papillary dermis has thinner fibers (papillary_density = 0.3). Epidermis = 0.

Wound response: zeros elastin in wound voxels (fiber disruption).

Source term: fibroblast production at production_rate per step (when fibroblast module active). MMP degradation at mmp_degradation * local_mmp per step.

Parameters

From modules/elastin/config.toml:

Parameter Default Units Description Source
enabled false bool Master switch (groundwork module) Convention
diffusion 0.0 - Structural ECM, immobile Convention
decay 0.0002 per step Very slow turnover (t1/2 ~70 years) Kielty et al. 2002 (DOI)
basal_density 0.5 normalized Baseline in reticular dermis Kielty et al. 2002
papillary_density 0.3 normalized Thinner fibers in papillary dermis Kielty et al. 2002
production_rate 0.0005 per step Tropoelastin from fibroblasts Mithieux & Weiss 2005 (DOI)
mmp_degradation 0.003 per step Elastase/MMP-9 degrades elastin Kielty et al. 2002

Coupling

Reads

Field Source module How used
MMP mmp Degradation of elastic fibers

Writes

Field Consumer modules What is written
Elastin (visualization, future mechanical coupling) Elastic fiber density per voxel

Validation

No validation dataset yet. Parameter values derived from:

  • Kielty et al. 2002: elastic fiber structure and turnover
  • Mithieux & Weiss 2005: tropoelastin production rates
  • Almine et al. 2012: elastin biology review

Metrics

Column Units Description
mean_elastin_wound a.u. Mean elastin in wound

Source files

File Purpose
elastin_pde.h Elastin PDE with sub-layer profile and MMP degradation
config.toml Module configuration