any chance for better documentation

[Apirog9]

Hello,

I feel a bit lost between papers and methods contained in the package,
I have several questions:
Where are the functionality of MSqRobSum in this package?
Where are the functionality of msqrob and msqrobAggregate described in detail, if possible? reading the documentation, seem that msqrob do not use peptide intensities at all, relying on QFeature aggregation, or I am wrong?
I understand that using hudle workflow prevents from obtaining per-sample protein amount estimation, is this right?

thanks,

Artur Pirog