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DOC: fix typos
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permute/core.py

Lines changed: 6 additions & 6 deletions
Original file line numberDiff line numberDiff line change
@@ -196,15 +196,15 @@ def two_sample(x, y, reps=10**5, stat='mean', alternative="greater",
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approximating the permutation distribution.
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The t-statistic is computed using scipy.stats.ttest_ind
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(c) If stat is a function (a callable object), the test statistic is
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that function. The function should take two arguments:
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that function. The function should take two arguments:
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given a permutation of the pooled data, the first argument is the
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"new" x and the second argument is the "new" y.
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For instance, if the test statistic is the Kolmogorov-Smirnov distance
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between the empirical distributions of the two samples,
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$\max_t |F_x(t) - F_y(t)|$, the test statistic could be written:
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f = lambda u, v: np.max( \
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[abs(sum(u<=v)/len(u)-sum(v<=val)/len(v)) for val in np.concatenate([u, v])]\
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[abs(sum(u<=val)/len(u)-sum(v<=val)/len(v)) for val in np.concatenate([u, v])]\
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)
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alternative : {'greater', 'less', 'two-sided'}
@@ -298,15 +298,15 @@ def two_sample_shift(x, y, reps=10**5, stat='mean', alternative="greater",
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approximating the permutation distribution.
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The t-statistic is computed using scipy.stats.ttest_ind
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(c) If stat is a function (a callable object), the test statistic is
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that function.The function should take two arguments:
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that function. The function should take two arguments:
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given a permutation of the pooled data, the first argument is the
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"new" x and the second argument is the "new" y.
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For instance, if the test statistic is the Kolmogorov-Smirnov distance
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between the empirical distributions of the two samples,
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$\max_t |F_x(t) - F_y(t)|$, the test statistic could be written:
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f = lambda u, v: np.max( \
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[abs(sum(u<=v)/len(u)-sum(v<=val)/len(v)) for val in np.concatenate([u, v])]\
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[abs(sum(u<=val)/len(u)-sum(v<=val)/len(v)) for val in np.concatenate([u, v])]\
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)
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alternative : {'greater', 'less', 'two-sided'}
@@ -414,15 +414,15 @@ def two_sample_conf_int(x, y, cl=0.95, alternative="two-sided", seed=None,
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approximating the permutation distribution.
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The t-statistic is computed using scipy.stats.ttest_ind
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(c) If stat is a function (a callable object), the test statistic is
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that function.The function should take two arguments:
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that function. The function should take two arguments:
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given a permutation of the pooled data, the first argument is the
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"new" x and the second argument is the "new" y.
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For instance, if the test statistic is the Kolmogorov-Smirnov distance
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between the empirical distributions of the two samples,
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$\max_t |F_x(t) - F_y(t)|$, the test statistic could be written:
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f = lambda u, v: np.max( \
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[abs(sum(u<=v)/len(u)-sum(v<=val)/len(v)) for val in np.concatenate([u, v])]\
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[abs(sum(u<=val)/len(u)-sum(v<=val)/len(v)) for val in np.concatenate([u, v])]\
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)
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shift : float

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