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feat(lib): added stats/incr/nanstdev package
This commits add a package nanstdev, which works like stdev in which it calculates corrected sample standard deviation incrementally ignoring NaN values --- type: pre_commit_static_analysis_report description: Results of running static analysis checks when committing changes. report: - task: lint_filenames status: passed - task: lint_editorconfig status: passed - task: lint_markdown status: passed - task: lint_package_json status: passed - task: lint_repl_help status: passed - task: lint_javascript_src status: passed - task: lint_javascript_cli status: na - task: lint_javascript_examples status: passed - task: lint_javascript_tests status: passed - task: lint_javascript_benchmarks status: passed - task: lint_python status: na - task: lint_r status: na - task: lint_c_src status: na - task: lint_c_examples status: na - task: lint_c_benchmarks status: na - task: lint_c_tests_fixtures status: na - task: lint_shell status: na - task: lint_typescript_declarations status: passed - task: lint_typescript_tests status: passed - task: lint_license_headers status: passed ---
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‎lib/node_modules/@stdlib/stats/incr/nanstdev/README.md‎

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<!--
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@license Apache-2.0
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Copyright (c) 2020 The Stdlib Authors.
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Licensed under the Apache License, Version 2.0 (the "License");
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you may not use this file except in compliance with the License.
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You may obtain a copy of the License at
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http://www.apache.org/licenses/LICENSE-2.0
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Unless required by applicable law or agreed to in writing, software
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distributed under the License is distributed on an "AS IS" BASIS,
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WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
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See the License for the specific language governing permissions and
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limitations under the License.
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-->
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# incrnanstdev
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> Compute a [corrected sample standard deviation][sample-stdev] incrementally, ignoring `NaN` values.
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<section class="intro">
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The [corrected sample standard deviation][sample-stdev] is defined as
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<!-- <equation class="equation" label="eq:corrected_sample_standard_deviation" align="center" raw="s = \sqrt{\frac{1}{n-1} \sum_{i=0}^{n-1} ( x_i - \bar{x} )^2}" alt="Equation for the corrected sample standard deviation."> -->
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```math
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s = \sqrt{\frac{1}{n-1} \sum_{i=0}^{n-1} ( x_i - \bar{x} )^2}
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```
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<!-- <div class="equation" align="center" data-raw-text="s = \sqrt{\frac{1}{n-1} \sum_{i=0}^{n-1} ( x_i - \bar{x} )^2}" data-equation="eq:corrected_sample_standard_deviation">
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<img src="https://cdn.jsdelivr.net/gh/stdlib-js/stdlib@49d8cabda84033d55d7b8069f19ee3dd8b8d1496/lib/node_modules/@stdlib/stats/incr/nanstdev/docs/img/equation_corrected_sample_standard_deviation.svg" alt="Equation for the corrected sample standard deviation.">
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<br>
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</div> -->
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<!-- </equation> -->
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</section>
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<!-- /.intro -->
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<section class="usage">
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## Usage
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```javascript
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var incrnanstdev = require( '@stdlib/stats/incr/nanstdev' );
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```
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#### incrnanstdev( \[mean] )
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Returns an accumulator `function` which incrementally computes a [corrected sample standard deviation][sample-stdev], ignoring `NaN` values.
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```javascript
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var accumulator = incrnanstdev();
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```
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If the mean is already known, provide a `mean` argument.
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```javascript
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var accumulator = incrnanstdev( 3.0 );
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```
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#### accumulator( \[x] )
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If provided an input value `x`, the accumulator function returns an updated [corrected sample standard deviation][sample-stdev]. If not provided an input value `x`, the accumulator function returns the current [corrected sample standard deviation][sample-stdev].
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```javascript
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var accumulator = incrnanstdev();
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var s = accumulator( 2.0 );
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// returns 0.0
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s = accumulator( 1.0 ); // => sqrt(((2-1.5)^2+(1-1.5)^2) / (2-1))
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// returns ~0.7071
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s = accumulator( 3.0 ); // => sqrt(((2-2)^2+(1-2)^2+(3-2)^2) / (3-1))
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// returns 1.0
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s = accumulator( NaN );
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// returns 1.0
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s = accumulator();
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// returns 1.0
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```
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</section>
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<!-- /.usage -->
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<section class="notes">
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## Notes
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- Input values are **not** type checked. If non-numeric inputs are possible, you are advised to type check and handle accordingly **before** passing the value to the accumulator function.
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</section>
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<!-- /.notes -->
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<section class="examples">
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## Examples
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<!-- eslint no-undef: "error" -->
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```javascript
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var randu = require( '@stdlib/random/base/randu' );
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var incrnanstdev = require( '@stdlib/stats/incr/nanstdev' );
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var accumulator;
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var v;
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var i;
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// Initialize an accumulator:
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accumulator = incrnanstdev();
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// For each simulated datum, update the sample standard deviation...
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for ( i = 0; i < 100; i++ ) {
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if ( randu() < 0.2 ) {
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v = NaN;
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} else {
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v = randu() * 100.0;
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}
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accumulator( v );
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}
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console.log( accumulator() );
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```
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</section>
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<!-- /.examples -->
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<!-- Section for related `stdlib` packages. Do not manually edit this section, as it is automatically populated. -->
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<section class="related">
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* * *
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## See Also
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- <span class="package-name">[`@stdlib/stats/incr/kurtosis`][@stdlib/stats/incr/kurtosis]</span><span class="delimiter">: </span><span class="description">compute a corrected sample excess kurtosis incrementally.</span>
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- <span class="package-name">[`@stdlib/stats/incr/mean`][@stdlib/stats/incr/mean]</span><span class="delimiter">: </span><span class="description">compute an arithmetic mean incrementally.</span>
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- <span class="package-name">[`@stdlib/stats/incr/mstdev`][@stdlib/stats/incr/mstdev]</span><span class="delimiter">: </span><span class="description">compute a moving corrected sample standard deviation incrementally.</span>
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- <span class="package-name">[`@stdlib/stats/incr/skewness`][@stdlib/stats/incr/skewness]</span><span class="delimiter">: </span><span class="description">compute a corrected sample skewness incrementally.</span>
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- <span class="package-name">[`@stdlib/stats/incr/summary`][@stdlib/stats/incr/summary]</span><span class="delimiter">: </span><span class="description">compute a statistical summary incrementally.</span>
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- <span class="package-name">[`@stdlib/stats/incr/variance`][@stdlib/stats/incr/variance]</span><span class="delimiter">: </span><span class="description">compute an unbiased sample variance incrementally.</span>
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- <span class="package-name">[`@stdlib/stats/incr/stdev`][@stdlib/stats/incr/stdev]</span><span class="delimiter">: </span><span class="description">compute a [corrected sample standard deviation][sample-stdev] incrementally.</span>
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</section>
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<!-- /.related -->
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<!-- Section for all links. Make sure to keep an empty line after the `section` element and another before the `/section` close. -->
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<section class="links">
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[sample-stdev]: https://en.wikipedia.org/wiki/Standard_deviation
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<!-- <related-links> -->
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[@stdlib/stats/incr/kurtosis]: https://github.com/stdlib-js/stdlib/tree/develop/lib/node_modules/%40stdlib/stats/incr/kurtosis
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[@stdlib/stats/incr/mean]: https://github.com/stdlib-js/stdlib/tree/develop/lib/node_modules/%40stdlib/stats/incr/mean
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[@stdlib/stats/incr/mstdev]: https://github.com/stdlib-js/stdlib/tree/develop/lib/node_modules/%40stdlib/stats/incr/mstdev
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[@stdlib/stats/incr/skewness]: https://github.com/stdlib-js/stdlib/tree/develop/lib/node_modules/%40stdlib/stats/incr/skewness
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[@stdlib/stats/incr/summary]: https://github.com/stdlib-js/stdlib/tree/develop/lib/node_modules/%40stdlib/stats/incr/summary
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[@stdlib/stats/incr/variance]: https://github.com/stdlib-js/stdlib/tree/develop/lib/node_modules/%40stdlib/stats/incr/variance
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[@stdlib/stats/incr/stdev]: https://github.com/stdlib-js/stdlib/tree/develop/lib/node_modules/%40stdlib/stats/incr/nanstdev
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<!-- </related-links> -->
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</section>
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<!-- /.links -->

‎lib/node_modules/@stdlib/stats/incr/nanstdev/benchmark/benchmark.js‎

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/**
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* @license Apache-2.0
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*
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* Copyright (c) 2018 The Stdlib Authors.
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*
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* Licensed under the Apache License, Version 2.0 (the "License");
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* you may not use this file except in compliance with the License.
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* You may obtain a copy of the License at
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*
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* http://www.apache.org/licenses/LICENSE-2.0
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*
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* Unless required by applicable law or agreed to in writing, software
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* distributed under the License is distributed on an "AS IS" BASIS,
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* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
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* See the License for the specific language governing permissions and
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* limitations under the License.
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*/
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'use strict';
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// MODULES //
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var bench = require( '@stdlib/bench' );
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var randu = require( '@stdlib/random/base/randu' );
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var pkg = require( './../package.json' ).name;
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var incrnanstdev = require( './../lib' );
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// MAIN //
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bench( pkg, function benchmark( b ) {
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var f;
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var i;
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b.tic();
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for ( i = 0; i < b.iterations; i++ ) {
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f = incrnanstdev();
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if ( typeof f !== 'function' ) {
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b.fail( 'should return a function' );
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}
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}
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b.toc();
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if ( typeof f !== 'function' ) {
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b.fail( 'should return a function' );
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}
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b.pass( 'benchmark finished' );
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b.end();
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});
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bench( pkg+'::accumulator', function benchmark( b ) {
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var acc;
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var v;
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var i;
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acc = incrnanstdev();
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b.tic();
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for ( i = 0; i < b.iterations; i++ ) {
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v = acc( randu() );
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if ( v !== v ) {
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b.fail( 'should not return NaN' );
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}
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}
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b.toc();
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if ( v !== v ) {
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b.fail( 'should not return NaN' );
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}
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b.pass( 'benchmark finished' );
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b.end();
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});
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bench( pkg+'::accumulator,known_mean', function benchmark( b ) {
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var acc;
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var v;
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var i;
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acc = incrnanstdev( 3.0 );
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b.tic();
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for ( i = 0; i < b.iterations; i++ ) {
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v = acc( randu() );
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if ( v !== v ) {
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b.fail( 'should not return NaN' );
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}
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}
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b.toc();
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if ( v !== v ) {
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b.fail( 'should not return NaN' );
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}
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b.pass( 'benchmark finished' );
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b.end();
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});

‎lib/node_modules/@stdlib/stats/incr/nanstdev/docs/img/equation_corrected_sample_standard_deviation.svg‎

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‎lib/node_modules/@stdlib/stats/incr/nanstdev/docs/repl.txt‎

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{{alias}}( [mean] )
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Returns an accumulator function which incrementally computes a corrected
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sample standard deviation, ignoring `NaN` values.
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If provided a value, the accumulator function returns an updated corrected
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sample standard deviation. If not provided a value, the accumulator function
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returns the current corrected sample standard deviation.
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Parameters
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----------
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mean: number (optional)
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Known mean.
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Returns
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-------
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acc: Function
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Accumulator function.
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Examples
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--------
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> var accumulator = {{alias}}();
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> var s = accumulator()
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null
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> s = accumulator( 2.0 )
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0.0
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> s = accumulator( -5.0 )
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~4.95
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> s = accumulator( NaN )
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~4.95
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> s = accumulator()
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~4.95
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See Also
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--------
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