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feat: add C implementation for stats/base/dists/exponential/mode
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15 files changed

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-2
lines changed

15 files changed

+1158
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lib/node_modules/@stdlib/stats/base/dists/exponential/mode/benchmark/benchmark.js

Lines changed: 9 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -21,6 +21,7 @@
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// MODULES //
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var bench = require( '@stdlib/bench' );
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var Float64Array = require( '@stdlib/array/float64' );
2425
var randu = require( '@stdlib/random/base/randu' );
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var isnan = require( '@stdlib/math/base/assert/is-nan' );
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var EPS = require( '@stdlib/constants/float64/eps' );
@@ -32,13 +33,19 @@ var mode = require( './../lib' );
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bench( pkg, function benchmark( b ) {
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var lambda;
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var len;
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var y;
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var i;
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len = 100;
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lambda = new Float64Array( len );
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for ( i = 0; i < len; i++ ) {
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lambda[ i ] = ( randu()*20.0 ) + EPS;
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}
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b.tic();
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for ( i = 0; i < b.iterations; i++ ) {
40-
lambda = ( randu()*20.0 ) + EPS;
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y = mode( lambda );
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y = mode( lambda[ i % len ] );
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if ( isnan( y ) ) {
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b.fail( 'should not return NaN' );
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}
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@@ -0,0 +1,68 @@
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/**
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* @license Apache-2.0
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*
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* Copyright (c) 2024 The Stdlib Authors.
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*
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* Licensed under the Apache License, Version 2.0 (the "License");
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* you may not use this file except in compliance with the License.
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* You may obtain a copy of the License at
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*
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* http://www.apache.org/licenses/LICENSE-2.0
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*
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* Unless required by applicable law or agreed to in writing, software
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* distributed under the License is distributed on an "AS IS" BASIS,
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* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
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* See the License for the specific language governing permissions and
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* limitations under the License.
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*/
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'use strict';
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// MODULES //
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var resolve = require( 'path' ).resolve;
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var bench = require( '@stdlib/bench' );
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var Float64Array = require( '@stdlib/array/float64' );
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var randu = require( '@stdlib/random/base/randu' );
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var EPS = require( '@stdlib/constants/float64/eps' );
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var isnan = require( '@stdlib/math/base/assert/is-nan' );
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var tryRequire = require( '@stdlib/utils/try-require' );
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var pkg = require( './../package.json' ).name;
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// VARIABLES //
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var mode = tryRequire( resolve( __dirname, './../lib/native.js' ) );
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var opts = {
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'skip': ( mode instanceof Error )
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};
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// MAIN //
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bench( pkg+'::native', opts, function benchmark( b ) {
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var lambda;
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var len;
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var y;
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var i;
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len = 100;
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lambda = new Float64Array( len );
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for ( i = 0; i < len; i++ ) {
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lambda[ i ] = ( randu()*20.0 ) + EPS;
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}
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b.tic();
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for ( i = 0; i < b.iterations; i++ ) {
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y = mode( lambda[ i % len ] );
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if ( isnan( y ) ) {
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b.fail( 'should not return NaN' );
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}
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}
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b.toc();
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if ( isnan( y ) ) {
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b.fail( 'should not return NaN' );
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}
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b.pass( 'benchmark finished' );
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b.end();
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});
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#/
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# @license Apache-2.0
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#
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# Copyright (c) 2024 The Stdlib Authors.
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#
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# Licensed under the Apache License, Version 2.0 (the "License");
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# you may not use this file except in compliance with the License.
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# You may obtain a copy of the License at
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#
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# http://www.apache.org/licenses/LICENSE-2.0
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#
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# Unless required by applicable law or agreed to in writing, software
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# distributed under the License is distributed on an "AS IS" BASIS,
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# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
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# See the License for the specific language governing permissions and
16+
# limitations under the License.
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#/
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# VARIABLES #
20+
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ifndef VERBOSE
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QUIET := @
23+
else
24+
QUIET :=
25+
endif
26+
27+
# Determine the OS ([1][1], [2][2]).
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#
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# [1]: https://en.wikipedia.org/wiki/Uname#Examples
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# [2]: http://stackoverflow.com/a/27776822/2225624
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OS ?= $(shell uname)
32+
ifneq (, $(findstring MINGW,$(OS)))
33+
OS := WINNT
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else
35+
ifneq (, $(findstring MSYS,$(OS)))
36+
OS := WINNT
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else
38+
ifneq (, $(findstring CYGWIN,$(OS)))
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OS := WINNT
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else
41+
ifneq (, $(findstring Windows_NT,$(OS)))
42+
OS := WINNT
43+
endif
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endif
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endif
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endif
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# Define the program used for compiling C source files:
49+
ifdef C_COMPILER
50+
CC := $(C_COMPILER)
51+
else
52+
CC := gcc
53+
endif
54+
55+
# Define the command-line options when compiling C files:
56+
CFLAGS ?= \
57+
-std=c99 \
58+
-O3 \
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-Wall \
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-pedantic
61+
62+
# Determine whether to generate position independent code ([1][1], [2][2]).
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#
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# [1]: https://gcc.gnu.org/onlinedocs/gcc/Code-Gen-Options.html#Code-Gen-Options
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# [2]: http://stackoverflow.com/questions/5311515/gcc-fpic-option
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ifeq ($(OS), WINNT)
67+
fPIC ?=
68+
else
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fPIC ?= -fPIC
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endif
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# List of includes (e.g., `-I /foo/bar -I /beep/boop/include`):
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INCLUDE ?=
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# List of source files:
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SOURCE_FILES ?=
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# List of libraries (e.g., `-lopenblas -lpthread`):
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LIBRARIES ?=
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# List of library paths (e.g., `-L /foo/bar -L /beep/boop`):
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LIBPATH ?=
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# List of C targets:
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c_targets := benchmark.out
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# RULES #
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#/
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# Compiles source files.
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#
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# @param {string} [C_COMPILER] - C compiler (e.g., `gcc`)
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# @param {string} [CFLAGS] - C compiler options
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# @param {(string|void)} [fPIC] - compiler flag determining whether to generate position independent code (e.g., `-fPIC`)
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# @param {string} [INCLUDE] - list of includes (e.g., `-I /foo/bar -I /beep/boop/include`)
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# @param {string} [SOURCE_FILES] - list of source files
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# @param {string} [LIBPATH] - list of library paths (e.g., `-L /foo/bar -L /beep/boop`)
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# @param {string} [LIBRARIES] - list of libraries (e.g., `-lopenblas -lpthread`)
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#
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# @example
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# make
103+
#
104+
# @example
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# make all
106+
#/
107+
all: $(c_targets)
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.PHONY: all
110+
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#/
112+
# Compiles C source files.
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#
114+
# @private
115+
# @param {string} CC - C compiler (e.g., `gcc`)
116+
# @param {string} CFLAGS - C compiler options
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# @param {(string|void)} fPIC - compiler flag determining whether to generate position independent code (e.g., `-fPIC`)
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# @param {string} INCLUDE - list of includes (e.g., `-I /foo/bar`)
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# @param {string} SOURCE_FILES - list of source files
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# @param {string} LIBPATH - list of library paths (e.g., `-L /foo/bar`)
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# @param {string} LIBRARIES - list of libraries (e.g., `-lopenblas`)
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#/
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$(c_targets): %.out: %.c
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$(QUIET) $(CC) $(CFLAGS) $(fPIC) $(INCLUDE) -o $@ $(SOURCE_FILES) $< $(LIBPATH) -lm $(LIBRARIES)
125+
126+
#/
127+
# Runs compiled benchmarks.
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#
129+
# @example
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# make run
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#/
132+
run: $(c_targets)
133+
$(QUIET) ./$<
134+
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.PHONY: run
136+
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#/
138+
# Removes generated files.
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#
140+
# @example
141+
# make clean
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#/
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clean:
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$(QUIET) -rm -f *.o *.out
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.PHONY: clean
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@@ -0,0 +1,136 @@
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/**
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* @license Apache-2.0
3+
*
4+
* Copyright (c) 2024 The Stdlib Authors.
5+
*
6+
* Licensed under the Apache License, Version 2.0 (the "License");
7+
* you may not use this file except in compliance with the License.
8+
* You may obtain a copy of the License at
9+
*
10+
* http://www.apache.org/licenses/LICENSE-2.0
11+
*
12+
* Unless required by applicable law or agreed to in writing, software
13+
* distributed under the License is distributed on an "AS IS" BASIS,
14+
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
15+
* See the License for the specific language governing permissions and
16+
* limitations under the License.
17+
*/
18+
19+
#include "stdlib/stats/base/dists/exponential/mode.h"
20+
#include <stdlib.h>
21+
#include <stdio.h>
22+
#include <math.h>
23+
#include <time.h>
24+
#include <sys/time.h>
25+
26+
#define NAME "exponential-mode"
27+
#define ITERATIONS 1000000
28+
#define REPEATS 3
29+
30+
/**
31+
* Prints the TAP version.
32+
*/
33+
static void print_version( void ) {
34+
printf( "TAP version 13\n" );
35+
}
36+
37+
/**
38+
* Prints the TAP summary.
39+
*
40+
* @param total total number of tests
41+
* @param passing total number of passing tests
42+
*/
43+
static void print_summary( int total, int passing ) {
44+
printf( "#\n" );
45+
printf( "1..%d\n", total ); // TAP plan
46+
printf( "# total %d\n", total );
47+
printf( "# pass %d\n", passing );
48+
printf( "#\n" );
49+
printf( "# ok\n" );
50+
}
51+
52+
/**
53+
* Prints benchmarks results.
54+
*
55+
* @param elapsed elapsed time in seconds
56+
*/
57+
static void print_results( double elapsed ) {
58+
double rate = (double)ITERATIONS / elapsed;
59+
printf( " ---\n" );
60+
printf( " iterations: %d\n", ITERATIONS );
61+
printf( " elapsed: %0.9f\n", elapsed );
62+
printf( " rate: %0.9f\n", rate );
63+
printf( " ...\n" );
64+
}
65+
66+
/**
67+
* Returns a clock time.
68+
*
69+
* @return clock time
70+
*/
71+
static double tic( void ) {
72+
struct timeval now;
73+
gettimeofday( &now, NULL );
74+
return (double)now.tv_sec + (double)now.tv_usec/1.0e6;
75+
}
76+
77+
/**
78+
* Generates a random number on the interval [0,20).
79+
*
80+
* @return random number
81+
*/
82+
static double rand_double( void ) {
83+
int r = rand();
84+
return 20.0*(double)r / ( (double)RAND_MAX + 1.0 );
85+
}
86+
87+
/**
88+
* Runs a benchmark.
89+
*
90+
* @return elapsed time in seconds
91+
*/
92+
static double benchmark( void ) {
93+
double elapsed;
94+
double lambda[ 100 ];
95+
double y;
96+
double t;
97+
int i;
98+
99+
for ( i = 0; i < 100; i++ ) {
100+
lambda[ i ] = rand_double();
101+
}
102+
103+
t = tic();
104+
for ( i = 0; i < ITERATIONS; i++ ) {
105+
y = stdlib_base_dists_exponential_mode( lambda[ i%100 ] );
106+
if ( y != y ) {
107+
printf( "should not return NaN\n" );
108+
break;
109+
}
110+
}
111+
elapsed = tic() - t;
112+
if ( y != y ) {
113+
printf( "should not return NaN\n" );
114+
}
115+
return elapsed;
116+
}
117+
118+
/**
119+
* Main execution sequence.
120+
*/
121+
int main( void ) {
122+
double elapsed;
123+
int i;
124+
125+
// Use the current time to seed the random number generator:
126+
srand( time( NULL ) );
127+
128+
print_version();
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for ( i = 0; i < REPEATS; i++ ) {
130+
printf( "# c::%s\n", NAME );
131+
elapsed = benchmark();
132+
print_results( elapsed );
133+
printf( "ok %d benchmark finished\n", i+1 );
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}
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print_summary( REPEATS, REPEATS );
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}

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