Request for environment setup (conda/Docker) for glycoprotein_trees.R

[NaturalCutie]

Hi, thanks for sharing this great project!

I am trying to run glycoprotein_trees.R, but I keep running into dependency and environment issues (mainly with R packages such as ggtree, phangorn, Quartet, etc.).

Would it be possible for you to provide:

• a conda environment.yml (preferred), or
• a Dockerfile / container image

so that users can reproduce the environment easily?

This would make it much easier to run the analyses without struggling with system- or package-level incompatibilities.

Thanks a lot for your help!