update README

Author: stemangiola

README.Rmd

@@ -167,7 +167,3 @@ get_metadata() |>
 knitr::include_graphics("inst/NCAM1_figure.png")
 ```
 
-```{r}
-sessionInfo()
-```
-

README.md

@@ -233,106 +233,3 @@ get_metadata() |>
 ```
 
 <img src="inst/NCAM1_figure.png" width="629" />
-
-``` r
-sessionInfo()
-#> R version 4.2.0 (2022-04-22)
-#> Platform: x86_64-pc-linux-gnu (64-bit)
-#> Running under: CentOS Linux 7 (Core)
-#> 
-#> Matrix products: default
-#> BLAS:   /stornext/System/data/apps/R/R-4.2.0/lib64/R/lib/libRblas.so
-#> LAPACK: /stornext/System/data/apps/R/R-4.2.0/lib64/R/lib/libRlapack.so
-#> 
-#> locale:
-#>  [1] LC_CTYPE=en_US.UTF-8       LC_NUMERIC=C              
-#>  [3] LC_TIME=en_US.UTF-8        LC_COLLATE=en_US.UTF-8    
-#>  [5] LC_MONETARY=en_US.UTF-8    LC_MESSAGES=en_US.UTF-8   
-#>  [7] LC_PAPER=en_US.UTF-8       LC_NAME=C                 
-#>  [9] LC_ADDRESS=C               LC_TELEPHONE=C            
-#> [11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C       
-#> 
-#> attached base packages:
-#> [1] stats     graphics  grDevices utils     datasets  methods   base     
-#> 
-#> other attached packages:
-#> [1] stringr_1.5.0            dplyr_1.1.0              CuratedAtlasQueryR_0.1.0
-#> [4] dbplyr_2.3.0            
-#> 
-#> loaded via a namespace (and not attached):
-#>   [1] plyr_1.8.8                  igraph_1.3.5               
-#>   [3] lazyeval_0.2.2              sp_1.5-1                   
-#>   [5] splines_4.2.0               listenv_0.9.0              
-#>   [7] scattermore_0.8             GenomeInfoDb_1.34.7        
-#>   [9] ggplot2_3.4.0               inline_0.3.19              
-#>  [11] digest_0.6.31               htmltools_0.5.4            
-#>  [13] fansi_1.0.4                 magrittr_2.0.3             
-#>  [15] memoise_2.0.1               tensor_1.5                 
-#>  [17] cluster_2.1.4               ROCR_1.0-11                
-#>  [19] globals_0.16.2              RcppParallel_5.1.6         
-#>  [21] matrixStats_0.63.0          spatstat.sparse_3.0-0      
-#>  [23] prettyunits_1.1.1           colorspace_2.1-0           
-#>  [25] blob_1.2.3                  ggrepel_0.9.2              
-#>  [27] xfun_0.36                   RCurl_1.98-1.9             
-#>  [29] callr_3.7.3                 crayon_1.5.2               
-#>  [31] jsonlite_1.8.4              progressr_0.13.0           
-#>  [33] spatstat.data_3.0-0         survival_3.5-0             
-#>  [35] zoo_1.8-11                  glue_1.6.2                 
-#>  [37] polyclip_1.10-4             gtable_0.3.1               
-#>  [39] zlibbioc_1.44.0             XVector_0.38.0             
-#>  [41] leiden_0.4.3                DelayedArray_0.24.0        
-#>  [43] V8_4.2.2                    pkgbuild_1.4.0             
-#>  [45] Rhdf5lib_1.20.0             rstan_2.26.6               
-#>  [47] future.apply_1.10.0         SingleCellExperiment_1.20.0
-#>  [49] BiocGenerics_0.44.0         HDF5Array_1.26.0           
-#>  [51] abind_1.4-5                 scales_1.2.1               
-#>  [53] DBI_1.1.3                   spatstat.random_3.0-1      
-#>  [55] miniUI_0.1.1.1              Rcpp_1.0.10                
-#>  [57] viridisLite_0.4.1           xtable_1.8-4               
-#>  [59] reticulate_1.27             bit_4.0.5                  
-#>  [61] stats4_4.2.0                StanHeaders_2.26.6         
-#>  [63] htmlwidgets_1.6.1           httr_1.4.4                 
-#>  [65] RColorBrewer_1.1-3          ellipsis_0.3.2             
-#>  [67] Seurat_4.3.0                ica_1.0-3                  
-#>  [69] pkgconfig_2.0.3             loo_2.5.1                  
-#>  [71] uwot_0.1.14                 deldir_1.0-6               
-#>  [73] utf8_1.2.2                  tidyselect_1.2.0           
-#>  [75] rlang_1.0.6                 reshape2_1.4.4             
-#>  [77] later_1.3.0                 munsell_0.5.0              
-#>  [79] tools_4.2.0                 cachem_1.0.6               
-#>  [81] cli_3.6.0                   generics_0.1.3             
-#>  [83] RSQLite_2.2.20              ggridges_0.5.4             
-#>  [85] evaluate_0.20               fastmap_1.1.0              
-#>  [87] yaml_2.3.7                  goftest_1.2-3              
-#>  [89] processx_3.8.0              knitr_1.42                 
-#>  [91] bit64_4.0.5                 fitdistrplus_1.1-8         
-#>  [93] purrr_1.0.1                 RANN_2.6.1                 
-#>  [95] pbapply_1.7-0               future_1.30.0              
-#>  [97] nlme_3.1-161                mime_0.12                  
-#>  [99] compiler_4.2.0              rstudioapi_0.14            
-#> [101] plotly_4.10.1               curl_5.0.0                 
-#> [103] png_0.1-8                   spatstat.utils_3.0-1       
-#> [105] tibble_3.1.8                stringi_1.7.12             
-#> [107] highr_0.10                  ps_1.7.2                   
-#> [109] lattice_0.20-45             Matrix_1.5-3               
-#> [111] vctrs_0.5.2                 pillar_1.8.1               
-#> [113] lifecycle_1.0.3             rhdf5filters_1.10.0        
-#> [115] spatstat.geom_3.0-3         lmtest_0.9-40              
-#> [117] RcppAnnoy_0.0.20            bitops_1.0-7               
-#> [119] data.table_1.14.6           cowplot_1.1.1              
-#> [121] irlba_2.3.5.1               GenomicRanges_1.50.2       
-#> [123] httpuv_1.6.8                patchwork_1.1.2            
-#> [125] R6_2.5.1                    promises_1.2.0.1           
-#> [127] KernSmooth_2.23-20          gridExtra_2.3              
-#> [129] IRanges_2.32.0              parallelly_1.34.0          
-#> [131] codetools_0.2-18            MASS_7.3-58.1              
-#> [133] assertthat_0.2.1            SummarizedExperiment_1.28.0
-#> [135] rhdf5_2.42.0                withr_2.5.0                
-#> [137] SeuratObject_4.1.3          sctransform_0.3.5          
-#> [139] GenomeInfoDbData_1.2.9      S4Vectors_0.36.1           
-#> [141] parallel_4.2.0              grid_4.2.0                 
-#> [143] tidyr_1.3.0                 rmarkdown_2.20             
-#> [145] MatrixGenerics_1.10.0       Rtsne_0.16                 
-#> [147] spatstat.explore_3.0-5      Biobase_2.58.0             
-#> [149] shiny_1.7.4
-```