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rebuild vignettes (#79)
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‎man/figures/gd/NTDs_map-1.png‎

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‎vignettes/opgd.Rmd‎

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@@ -39,7 +39,7 @@ g = gd_optunidisc(NDVIchange ~ .,
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data = dplyr::select(ndvi,-c(Climatezone,Mining)),
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discnum = 3:15, cores = 6)
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tictoc::toc()
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## 2.08 sec elapsed
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## 3.32 sec elapsed
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```
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‎vignettes/shegd.Rmd‎

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@@ -157,23 +157,23 @@ By accessing the concrete result through `lesh.m$interaction`, which returns a `
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``` r
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lesh.m$interaction
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## # A tibble: 15 × 8
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## variable1 variable2 Interaction Variable1 Q-statisti…¹ Variable2 Q-statisti…²
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## <chr> <chr> <chr> <dbl> <dbl>
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## 1 Climatezone Mining Weaken, uni- 0.821 0.140
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## 2 Climatezone Tempchange Weaken, uni- 0.821 0.333
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## 3 Climatezone Precipitation Enhance, bi- 0.821 0.873
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## 4 Climatezone GDP Enhance, bi- 0.821 0.0917
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## 5 Climatezone Popdensity Enhance, bi- 0.821 0.223
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## 6 Mining Tempchange Enhance, bi- 0.140 0.333
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## 7 Mining Precipitation Weaken, uni- 0.140 0.873
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## 8 Mining GDP Enhance, bi- 0.140 0.0917
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## 9 Mining Popdensity Enhance, bi- 0.140 0.223
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## 10 Tempchange Precipitation Enhance, bi- 0.333 0.873
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## 11 Tempchange GDP Enhance, nonlinear 0.333 0.0917
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## 12 Tempchange Popdensity Enhance, bi- 0.333 0.223
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## 13 Precipitation GDP Enhance, bi- 0.873 0.0917
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## 14 Precipitation Popdensity Enhance, bi- 0.873 0.223
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## 15 GDP Popdensity Weaken, uni- 0.0917 0.223
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## variable1 variable2 Interaction Variable1 Q-statisti…¹ Variable2 Q-statisti…²
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## <chr> <chr> <chr> <dbl> <dbl>
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## 1 Climatezone Mining Weaken, un… 0.821 0.140
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## 2 Climatezone Tempchan… Weaken, un… 0.821 0.333
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## 3 Climatezone Precipit… Enhance, b… 0.821 0.873
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## 4 Climatezone GDP Enhance, b… 0.821 0.0917
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## 5 Climatezone Popdensi… Enhance, b… 0.821 0.223
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## 6 Mining Tempchan… Enhance, b… 0.140 0.333
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## 7 Mining Precipit… Weaken, un… 0.140 0.873
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## 8 Mining GDP Enhance, b… 0.140 0.0917
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## 9 Mining Popdensi… Enhance, b… 0.140 0.223
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## 10 Tempchange Precipit… Enhance, b… 0.333 0.873
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## 11 Tempchange GDP Enhance, n… 0.333 0.0917
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## 12 Tempchange Popdensi… Enhance, b… 0.333 0.223
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## 13 Precipitati… GDP Enhance, b… 0.873 0.0917
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## 14 Precipitati… Popdensi… Enhance, b… 0.873 0.223
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## 15 GDP Popdensi… Weaken, un… 0.0917 0.223
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## # ℹ abbreviated names: ¹​`Variable1 Q-statistics`, ²​`Variable2 Q-statistics`
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## # ℹ 3 more variables: `Variable1 and Variable2 interact Q-statistics` <dbl>,
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## # `Variable1 SPD` <dbl>, `Variable2 SPD` <dbl>

‎vignettes/spade.Rmd‎

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## Bounding box: xmin: -83.1795 ymin: 32.11464 xmax: -78.6023 ymax: 35.17354
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## Geodetic CRS: WGS 84
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## # A tibble: 1,072 × 12
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## Depression_prevelence PopulationDensity Population65 NoHealthInsurance Neighbor_Disadvantage
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## * <dbl> <dbl> <dbl> <dbl> <dbl>
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## 1 23.1 61.5 22.5 7.98 -0.0525
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## 2 22.8 58.3 16.8 11.0 -0.254
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## 3 23.2 35.9 24.5 9.31 -0.0540
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## 4 21.8 76.1 21.8 13.2 0.0731
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## 5 20.7 47.3 22.0 11 0.763
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## 6 21.3 32.5 19.2 13.0 0.422
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## 7 22 36.9 19.2 10.8 0.113
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## 8 21.2 61.5 15.9 8.57 -0.154
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## 9 22.7 67.2 15.7 17.8 -0.320
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## 10 20.6 254. 11.3 12.7 0.457
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## Depression_prevelence PopulationDensity Population65 NoHealthInsurance
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## * <dbl> <dbl> <dbl> <dbl>
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## 1 23.1 61.5 22.5 7.98
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## 2 22.8 58.3 16.8 11.0
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## 3 23.2 35.9 24.5 9.31
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## 4 21.8 76.1 21.8 13.2
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## 5 20.7 47.3 22.0 11
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## 6 21.3 32.5 19.2 13.0
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## 7 22 36.9 19.2 10.8
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## 8 21.2 61.5 15.9 8.57
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## 9 22.7 67.2 15.7 17.8
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## 10 20.6 254. 11.3 12.7
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## # ℹ 1,062 more rows
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## # ℹ 7 more variables: Beer <dbl>, MentalHealthPati <dbl>, NatureParks <dbl>, Casinos <dbl>,
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## # ℹ 8 more variables: Neighbor_Disadvantage <dbl>, Beer <dbl>,
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## # MentalHealthPati <dbl>, NatureParks <dbl>, Casinos <dbl>,
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## # DrinkingPlaces <dbl>, X.HouseRent <dbl>, geometry <POINT [°]>
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```
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## # A tibble: 10 × 3
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## variable `Q-statistic` `P-value`
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## <chr> <dbl> <dbl>
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## 1 Neighbor_Disadvantage 0.140 4.96e-10
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## 2 PopulationDensity 0.0919 2.33e- 1
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## 3 Population65 0.0896 1.00e+ 0
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## 4 NoHealthInsurance 0.0678 6.48e- 1
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## 5 NatureParks 0.0596 1.00e+ 0
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## 6 DrinkingPlaces 0.0541 1.00e+ 0
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## 7 X.HouseRent 0.0344 1.00e+ 0
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## 8 Beer 0.0141 1 e+ 0
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## 9 MentalHealthPati 0.0130 1.00e+ 0
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## 10 Casinos 0.0121 1 e+ 0
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## 1 Neighbor_Disadvantage 0.140 4.96 e-10
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## 2 PopulationDensity 0.0919 2.33 e- 1
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## 3 Population65 0.0896 1.000e+ 0
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## 4 NoHealthInsurance 0.0678 6.48 e- 1
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## 5 NatureParks 0.0596 1.000e+ 0
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## 6 DrinkingPlaces 0.0541 1.000e+ 0
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## 7 X.HouseRent 0.0344 1.000e+ 0
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## 8 Beer 0.0141 1 e+ 0
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## 9 MentalHealthPati 0.0130 1.000e+ 0
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## 10 Casinos 0.0121 1 e+ 0
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```
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### Spatial Weight Matrix

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