Merge branch 'develop' into feature_conductivity

Author: Cristopher-Morales

Common/include/CConfig.hpp

@@ -804,6 +804,7 @@ class CConfig {
   nRefOriginMoment_Z;      /*!< \brief Number of Z-coordinate moment computation origins. */
   unsigned short nMesh_Box_Size;
   short *Mesh_Box_Size;          /*!< \brief Array containing the number of grid points in the x-, y-, and z-directions for the analytic RECTANGLE and BOX grid formats. */
+  unsigned short Mesh_Box_PSolFEM; /*!< \brief FEM polynomial degree of the solution for the RECTANGLE and BOX grid formats. */
   string Mesh_FileName,          /*!< \brief Mesh input file. */
   Mesh_Out_FileName,             /*!< \brief Mesh output file. */
   Solution_FileName,             /*!< \brief Flow solution input file. */
@@ -9606,6 +9607,12 @@ class CConfig {
    */
   su2double GetMeshBoxOffset(unsigned short val_iDim) const { return mesh_box_offset[val_iDim]; }
 
+  /*!
+   * \brief Get the polynomial degree of the FEM solution for the analytic RECTANGLE or BOX.
+   * \return The polynomial degree of the FEM solution.
+   */
+  unsigned short GetMeshBoxPSolFEM(void) const { return Mesh_Box_PSolFEM; }
+
   /*!
    * \brief Get the number of screen output variables requested (maximum 6)
    */

Common/include/fem/fem_cgns_elements.hpp

@@ -30,9 +30,6 @@
 
 #include "../geometry/CGeometry.hpp"
 #include "fem_standard_element.hpp"
-#ifdef HAVE_CGNS
-#include "fem_cgns_elements.hpp"
-#endif
 #include "../wall_model.hpp"
 #include "../linear_algebra/blas_structure.hpp"
 

Common/include/fem/fem_geometry_structure.hpp

@@ -28,7 +28,7 @@
 #pragma once
 
 #include "CGeometry.hpp"
-#include "meshreader/CMeshReaderFVM.hpp"
+#include "meshreader/CMeshReaderBase.hpp"
 #include "../containers/C2DContainer.hpp"
 
 /*!
@@ -285,51 +285,49 @@ class CPhysicalGeometry final : public CGeometry {
    * \param[in] val_iZone - Domain to be read from the grid file.
    * \param[in] val_nZone - Total number of domains in the grid file.
    */
-  void Read_Mesh_FVM(CConfig* config, const string& val_mesh_filename, unsigned short val_iZone,
-                     unsigned short val_nZone);
+  void Read_Mesh(CConfig* config, const string& val_mesh_filename, unsigned short val_iZone, unsigned short val_nZone);
 
   /*!
-   * \brief Reads for the FEM solver the geometry of the grid and adjust the boundary
-   *        conditions with the configuration file in parallel (for parmetis).
-   * \param[in] config - Definition of the particular problem.
-   * \param[in] val_mesh_filename - Name of the file with the grid information.
-   * \param[in] val_iZone - Domain to be read from the grid file.
-   * \param[in] val_nZone - Total number of domains in the grid file.
-   */
-  void Read_SU2_Format_Parallel_FEM(CConfig* config, const string& val_mesh_filename, unsigned short val_iZone,
-                                    unsigned short val_nZone);
-
-  /*!
-   * \brief Reads for the FEM solver the geometry of the grid and adjust the boundary
-   *        conditions with the configuration file in parallel (for parmetis).
-   * \param[in] config - Definition of the particular problem.
-   * \param[in] val_mesh_filename - Name of the file with the grid information.
-   * \param[in] val_iZone - Domain to be read from the grid file.
-   * \param[in] val_nZone - Total number of domains in the grid file.
+   * \brief Routine to load the CGNS grid points from a single zone into the proper SU2 data structures.
+   * \param[in] config - definition of the particular problem.
+   * \param[in] mesh   - mesh reader object containing the current zone data.
    */
-  void Read_CGNS_Format_Parallel_FEM(CConfig* config, const string& val_mesh_filename, unsigned short val_iZone,
-                                     unsigned short val_nZone);
+  void LoadLinearlyPartitionedPoints(CConfig* config, CMeshReaderBase* mesh);
 
   /*!
-   * \brief Routine to load the CGNS grid points from a single zone into the proper SU2 data structures.
+   * \brief Routine to load the grid points from a single zone into the proper SU2 data structures for the FEM solver.
    * \param[in] config - definition of the particular problem.
    * \param[in] mesh   - mesh reader object containing the current zone data.
    */
-  void LoadLinearlyPartitionedPoints(CConfig* config, CMeshReaderFVM* mesh);
+  void LoadLinearlyPartitionedPointsFEM(CConfig* config, CMeshReaderBase* mesh);
 
   /*!
    * \brief Loads the interior volume elements from the mesh reader object into the primal element data structures.
    * \param[in] config - definition of the particular problem.
    * \param[in] mesh   - mesh reader object containing the current zone data.
    */
-  void LoadLinearlyPartitionedVolumeElements(CConfig* config, CMeshReaderFVM* mesh);
+  void LoadLinearlyPartitionedVolumeElements(CConfig* config, CMeshReaderBase* mesh);
+
+  /*!
+   * \brief Loads the interior volume elements from the mesh reader object into the primal element data structures for
+   * the FEM solver. \param[in] config - definition of the particular problem. \param[in] mesh   - mesh reader object
+   * containing the current zone data.
+   */
+  void LoadLinearlyPartitionedVolumeElementsFEM(CConfig* config, CMeshReaderBase* mesh);
 
   /*!
    * \brief Loads the boundary elements (markers) from the mesh reader object into the primal element data structures.
    * \param[in] config - definition of the particular problem.
    * \param[in] mesh   - mesh reader object containing the current zone data.
    */
-  void LoadUnpartitionedSurfaceElements(CConfig* config, CMeshReaderFVM* mesh);
+  void LoadUnpartitionedSurfaceElements(CConfig* config, CMeshReaderBase* mesh);
+
+  /*!
+   * \brief Loads the boundary elements (markers) from the mesh reader object into the primal element data structures
+   * for the FEM solver. \param[in] config - definition of the particular problem. \param[in] mesh   - mesh reader
+   * object containing the current zone data.
+   */
+  void LoadLinearlyPartitionedSurfaceElementsFEM(CConfig* config, CMeshReaderBase* mesh);
 
   /*!
    * \brief Prepares the grid point adjacency based on a linearly partitioned mesh object needed by ParMETIS for graph

Common/include/geometry/CPhysicalGeometry.hpp

@@ -0,0 +1,82 @@
+/*!
+ * \file CBoxMeshReaderFEM.hpp
+ * \brief Header file for the class CBoxMeshReaderFEM.
+ *        The implementations are in the <i>CBoxMeshReaderFEM.cpp</i> file.
+ * \author T. Economon
+ * \version 8.1.0 "Harrier"
+ *
+ * SU2 Project Website: https://su2code.github.io
+ *
+ * The SU2 Project is maintained by the SU2 Foundation
+ * (http://su2foundation.org)
+ *
+ * Copyright 2012-2024, SU2 Contributors (cf. AUTHORS.md)
+ *
+ * SU2 is free software; you can redistribute it and/or
+ * modify it under the terms of the GNU Lesser General Public
+ * License as published by the Free Software Foundation; either
+ * version 2.1 of the License, or (at your option) any later version.
+ *
+ * SU2 is distributed in the hope that it will be useful,
+ * but WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+ * Lesser General Public License for more details.
+ *
+ * You should have received a copy of the GNU Lesser General Public
+ * License along with SU2. If not, see <http://www.gnu.org/licenses/>.
+ */
+
+#pragma once
+
+#include "CMeshReaderBase.hpp"
+
+/*!
+ * \class CBoxMeshReaderFEM
+ * \brief Reads a 3D box grid into linear partitions for the finite element solver (FEM).
+ * \author: T. Economon, E. van der Weide
+ */
+class CBoxMeshReaderFEM final : public CMeshReaderBase {
+ private:
+  unsigned long nNode; /*!< \brief Number of grid nodes in the x-direction. */
+  unsigned long mNode; /*!< \brief Number of grid nodes in the y-direction. */
+  unsigned long pNode; /*!< \brief Number of grid nodes in the z-direction. */
+
+  su2double Lx; /*!< \brief Length of the domain in the x-direction. */
+  su2double Ly; /*!< \brief Length of the domain in the y-direction. */
+  su2double Lz; /*!< \brief Length of the domain in the z-direction. */
+
+  su2double Ox; /*!< \brief Offset of the domain from 0.0 in the x-direction. */
+  su2double Oy; /*!< \brief Offset of the domain from 0.0 in the y-direction. */
+  su2double Oz; /*!< \brief Offset of the domain from 0.0 in the z-direction. */
+
+  unsigned short KindElem;  /*!< \brief VTK identifier of the interior elements. */
+  unsigned short KindBound; /*!< \brief VTK identifier of the surface elements. */
+
+  unsigned short nPolySol; /*!< \brief Polynomial degree of the solution. */
+
+  /*!
+   * \brief Computes and stores the grid points based on an analytic definition of a box grid.
+   */
+  void ComputeBoxPointCoordinates();
+
+  /*!
+   * \brief Computes and stores the volume element connectivity based on an analytic definition of a box grid.
+   */
+  void ComputeBoxVolumeConnectivity();
+
+  /*!
+   * \brief Computes and stores the surface element connectivity based on an analytic definition of a box grid.
+   */
+  void ComputeBoxSurfaceConnectivity();
+
+ public:
+  /*!
+   * \brief Constructor of the CBoxMeshReaderFEM class.
+   */
+  CBoxMeshReaderFEM(const CConfig* val_config, unsigned short val_iZone, unsigned short val_nZone);
+
+  /*!
+   * \brief Destructor of the CBoxMeshReaderFEM class.
+   */
+  ~CBoxMeshReaderFEM(void) override;
+};