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Remove 'data' dir from path; already in 'data' according to setup instructions
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_episodes/04-files.md

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@@ -28,12 +28,12 @@ while `?` matches any one character.
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We can use this to get the names of all the CSV files in the current directory:
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~~~
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print(glob.glob('data/inflammation*.csv'))
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print(glob.glob('inflammation*.csv'))
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~~~
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{: .python}
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~~~
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['data/inflammation-05.csv', 'data/inflammation-11.csv', 'data/inflammation-12.csv', 'data/inflammation-08.csv', 'data/inflammation-03.csv', 'data/inflammation-06.csv', 'data/inflammation-09.csv', 'data/inflammation-07.csv', 'data/inflammation-10.csv', 'data/inflammation-02.csv', 'data/inflammation-04.csv', 'data/inflammation-01.csv']
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['inflammation-05.csv', 'inflammation-11.csv', 'inflammation-12.csv', 'inflammation-08.csv', 'inflammation-03.csv', 'inflammation-06.csv', 'inflammation-09.csv', 'inflammation-07.csv', 'inflammation-10.csv', 'inflammation-02.csv', 'inflammation-04.csv', 'inflammation-01.csv']
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~~~
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{: .output}
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@@ -49,7 +49,7 @@ If we want to start by analyzing just the first three files in alphabetical orde
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import numpy
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import matplotlib.pyplot
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filenames = sorted(glob.glob('data/inflammation*.csv'))
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filenames = sorted(glob.glob('inflammation*.csv'))
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filenames = filenames[0:3]
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for f in filenames:
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print(f)
@@ -115,7 +115,7 @@ where the maxima are a bit less regular, but the minima are consistently zero.
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> > import numpy
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> > import matplotlib.pyplot
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> >
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> > filenames = glob.glob('data/inflammation*.csv')
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> > filenames = glob.glob('inflammation*.csv')
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> >
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> > data0 = numpy.loadtxt(fname=filenames[0], delimiter=',')
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> > data1 = numpy.loadtxt(fname=filenames[1], delimiter=',')
@@ -137,7 +137,7 @@ where the maxima are a bit less regular, but the minima are consistently zero.
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> Use each of the files once to generate a dataset containing values averaged over all patients:
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>
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> ~~~
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> filenames = glob.glob('data/inflammation*.csv')
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> filenames = glob.glob('inflammation*.csv')
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> composite_data = numpy.zeros((60,40))
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> for f in filenames:
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> # sum each new file's data into as it's read

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